Gene : Lsat_1_v5_gn_1_66080 L. sativa V8
Defline:  (1 of 2) PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Genomic Order:  2205
Name:  ? Lsat_1_v5_gn_1_66080 Secondary Identifier:  ? PAC:38942341
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_66080 0.5kb upstream 0.5kb upstream 4583   true Lsat_1_v8_lg_1: 78587959-78592541 Lactuca sativa
Lsat_1_v5_gn_1_66080 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 78587959-78588458 Lactuca sativa
Lsat_1_v5_gn_1_66080 0.5kb downstream 0.5kb downstream 4583   true Lsat_1_v8_lg_1: 78588459-78593041 Lactuca sativa
Lsat_1_v5_gn_1_66080 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 78592542-78593041 Lactuca sativa
Lsat_1_v5_gn_1_66080 1.0kb upstream 1.0kb upstream 5083   true Lsat_1_v8_lg_1: 78587459-78592541 Lactuca sativa
Lsat_1_v5_gn_1_66080 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 78587459-78588458 Lactuca sativa
Lsat_1_v5_gn_1_66080 1.0kb downstream 1.0kb downstream 5083   true Lsat_1_v8_lg_1: 78588459-78593541 Lactuca sativa
Lsat_1_v5_gn_1_66080 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 78592542-78593541 Lactuca sativa
Lsat_1_v5_gn_1_66080 2.0kb upstream 2.0kb upstream 6083   true Lsat_1_v8_lg_1: 78586459-78592541 Lactuca sativa
Lsat_1_v5_gn_1_66080 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 78586459-78588458 Lactuca sativa
Lsat_1_v5_gn_1_66080 2.0kb downstream 2.0kb downstream 6083   true Lsat_1_v8_lg_1: 78588459-78594541 Lactuca sativa
Lsat_1_v5_gn_1_66080 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 78592542-78594541 Lactuca sativa
Lsat_1_v5_gn_1_66080 5.0kb upstream 5.0kb upstream 9083   true Lsat_1_v8_lg_1: 78583459-78592541 Lactuca sativa
Lsat_1_v5_gn_1_66080 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 78583459-78588458 Lactuca sativa
Lsat_1_v5_gn_1_66080 5.0kb downstream 5.0kb downstream 9083   true Lsat_1_v8_lg_1: 78588459-78597541 Lactuca sativa
Lsat_1_v5_gn_1_66080 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 78592542-78597541 Lactuca sativa
Lsat_1_v5_gn_1_66080 10.0kb upstream 10.0kb upstream 14083   true Lsat_1_v8_lg_1: 78578459-78592541 Lactuca sativa
Lsat_1_v5_gn_1_66080 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 78578459-78588458 Lactuca sativa
Lsat_1_v5_gn_1_66080 10.0kb downstream 10.0kb downstream 14083   true Lsat_1_v8_lg_1: 78588459-78602541 Lactuca sativa
Lsat_1_v5_gn_1_66080 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 78592542-78602541 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471094 5263 Asterids View MSA
123753087 5271 Pentapetalae View MSA
122795715 5272 Eudicot View MSA
122045174 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain