Gene : Lsat_1_v5_gn_1_70420 L. sativa V8
Defline:  (1 of 200) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2366
Name:  ? Lsat_1_v5_gn_1_70420 Secondary Identifier:  ? PAC:38944151
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_70420 0.5kb upstream 0.5kb upstream 2308   true Lsat_1_v8_lg_1: 84411397-84413704 Lactuca sativa
Lsat_1_v5_gn_1_70420 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 84411397-84411896 Lactuca sativa
Lsat_1_v5_gn_1_70420 0.5kb downstream 0.5kb downstream 2308   true Lsat_1_v8_lg_1: 84411897-84414204 Lactuca sativa
Lsat_1_v5_gn_1_70420 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 84413705-84414204 Lactuca sativa
Lsat_1_v5_gn_1_70420 1.0kb upstream 1.0kb upstream 2808   true Lsat_1_v8_lg_1: 84410897-84413704 Lactuca sativa
Lsat_1_v5_gn_1_70420 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 84410897-84411896 Lactuca sativa
Lsat_1_v5_gn_1_70420 1.0kb downstream 1.0kb downstream 2808   true Lsat_1_v8_lg_1: 84411897-84414704 Lactuca sativa
Lsat_1_v5_gn_1_70420 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 84413705-84414704 Lactuca sativa
Lsat_1_v5_gn_1_70420 2.0kb upstream 2.0kb upstream 3808   true Lsat_1_v8_lg_1: 84409897-84413704 Lactuca sativa
Lsat_1_v5_gn_1_70420 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 84409897-84411896 Lactuca sativa
Lsat_1_v5_gn_1_70420 2.0kb downstream 2.0kb downstream 3808   true Lsat_1_v8_lg_1: 84411897-84415704 Lactuca sativa
Lsat_1_v5_gn_1_70420 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 84413705-84415704 Lactuca sativa
Lsat_1_v5_gn_1_70420 5.0kb upstream 5.0kb upstream 6808   true Lsat_1_v8_lg_1: 84406897-84413704 Lactuca sativa
Lsat_1_v5_gn_1_70420 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 84406897-84411896 Lactuca sativa
Lsat_1_v5_gn_1_70420 5.0kb downstream 5.0kb downstream 6808   true Lsat_1_v8_lg_1: 84411897-84418704 Lactuca sativa
Lsat_1_v5_gn_1_70420 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 84413705-84418704 Lactuca sativa
Lsat_1_v5_gn_1_70420 10.0kb upstream 10.0kb upstream 11808   true Lsat_1_v8_lg_1: 84401897-84413704 Lactuca sativa
Lsat_1_v5_gn_1_70420 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 84401897-84411896 Lactuca sativa
Lsat_1_v5_gn_1_70420 10.0kb downstream 10.0kb downstream 11808   true Lsat_1_v8_lg_1: 84411897-84423704 Lactuca sativa
Lsat_1_v5_gn_1_70420 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 84413705-84423704 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026319 5273 Angiosperm View MSA
121469798 5263 Asterids View MSA
123738212 5271 Pentapetalae View MSA
122786215 5272 Eudicot View MSA
121296277 5274 Embryophyte View MSA
123334471 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain