Gene : Lsat_1_v5_gn_1_70400 L. sativa V8
Defline:  (1 of 6) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase Genomic Order:  2365
Name:  ? Lsat_1_v5_gn_1_70400 Secondary Identifier:  ? PAC:38947193
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6622 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_70400 0.5kb upstream 0.5kb upstream 8614   true Lsat_1_v8_lg_1: 84401283-84409896 Lactuca sativa
Lsat_1_v5_gn_1_70400 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 84401283-84401782 Lactuca sativa
Lsat_1_v5_gn_1_70400 0.5kb downstream 0.5kb downstream 8614   true Lsat_1_v8_lg_1: 84401783-84410396 Lactuca sativa
Lsat_1_v5_gn_1_70400 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 84409897-84410396 Lactuca sativa
Lsat_1_v5_gn_1_70400 1.0kb upstream 1.0kb upstream 9114   true Lsat_1_v8_lg_1: 84400783-84409896 Lactuca sativa
Lsat_1_v5_gn_1_70400 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 84400783-84401782 Lactuca sativa
Lsat_1_v5_gn_1_70400 1.0kb downstream 1.0kb downstream 9114   true Lsat_1_v8_lg_1: 84401783-84410896 Lactuca sativa
Lsat_1_v5_gn_1_70400 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 84409897-84410896 Lactuca sativa
Lsat_1_v5_gn_1_70400 2.0kb upstream 2.0kb upstream 10114   true Lsat_1_v8_lg_1: 84399783-84409896 Lactuca sativa
Lsat_1_v5_gn_1_70400 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 84399783-84401782 Lactuca sativa
Lsat_1_v5_gn_1_70400 2.0kb downstream 2.0kb downstream 10114   true Lsat_1_v8_lg_1: 84401783-84411896 Lactuca sativa
Lsat_1_v5_gn_1_70400 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 84409897-84411896 Lactuca sativa
Lsat_1_v5_gn_1_70400 5.0kb upstream 5.0kb upstream 13114   true Lsat_1_v8_lg_1: 84396783-84409896 Lactuca sativa
Lsat_1_v5_gn_1_70400 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 84396783-84401782 Lactuca sativa
Lsat_1_v5_gn_1_70400 5.0kb downstream 5.0kb downstream 13114   true Lsat_1_v8_lg_1: 84401783-84414896 Lactuca sativa
Lsat_1_v5_gn_1_70400 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 84409897-84414896 Lactuca sativa
Lsat_1_v5_gn_1_70400 10.0kb upstream 10.0kb upstream 18114   true Lsat_1_v8_lg_1: 84391783-84409896 Lactuca sativa
Lsat_1_v5_gn_1_70400 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 84391783-84401782 Lactuca sativa
Lsat_1_v5_gn_1_70400 10.0kb downstream 10.0kb downstream 18114   true Lsat_1_v8_lg_1: 84401783-84419896 Lactuca sativa
Lsat_1_v5_gn_1_70400 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 84409897-84419896 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474778 5263 Asterids View MSA
123740730 5271 Pentapetalae View MSA
122788844 5272 Eudicot View MSA
122041588 5273 Angiosperm View MSA
121344484 5274 Embryophyte View MSA
123427454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain