Gene : Lsat_1_v5_gn_1_70360 L. sativa V8
Defline:  (1 of 6) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase Genomic Order:  2363
Name:  ? Lsat_1_v5_gn_1_70360 Secondary Identifier:  ? PAC:38943042
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6622 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_70360 0.5kb upstream 0.5kb upstream 16575   true Lsat_1_v8_lg_1: 84364381-84380955 Lactuca sativa
Lsat_1_v5_gn_1_70360 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 84364381-84364880 Lactuca sativa
Lsat_1_v5_gn_1_70360 0.5kb downstream 0.5kb downstream 16575   true Lsat_1_v8_lg_1: 84364881-84381455 Lactuca sativa
Lsat_1_v5_gn_1_70360 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 84380956-84381455 Lactuca sativa
Lsat_1_v5_gn_1_70360 1.0kb upstream 1.0kb upstream 17075   true Lsat_1_v8_lg_1: 84363881-84380955 Lactuca sativa
Lsat_1_v5_gn_1_70360 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 84363881-84364880 Lactuca sativa
Lsat_1_v5_gn_1_70360 1.0kb downstream 1.0kb downstream 17075   true Lsat_1_v8_lg_1: 84364881-84381955 Lactuca sativa
Lsat_1_v5_gn_1_70360 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 84380956-84381955 Lactuca sativa
Lsat_1_v5_gn_1_70360 2.0kb upstream 2.0kb upstream 18075   true Lsat_1_v8_lg_1: 84362881-84380955 Lactuca sativa
Lsat_1_v5_gn_1_70360 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 84362881-84364880 Lactuca sativa
Lsat_1_v5_gn_1_70360 2.0kb downstream 2.0kb downstream 18075   true Lsat_1_v8_lg_1: 84364881-84382955 Lactuca sativa
Lsat_1_v5_gn_1_70360 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 84380956-84382955 Lactuca sativa
Lsat_1_v5_gn_1_70360 5.0kb upstream 5.0kb upstream 21075   true Lsat_1_v8_lg_1: 84359881-84380955 Lactuca sativa
Lsat_1_v5_gn_1_70360 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 84359881-84364880 Lactuca sativa
Lsat_1_v5_gn_1_70360 5.0kb downstream 5.0kb downstream 21075   true Lsat_1_v8_lg_1: 84364881-84385955 Lactuca sativa
Lsat_1_v5_gn_1_70360 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 84380956-84385955 Lactuca sativa
Lsat_1_v5_gn_1_70360 10.0kb upstream 10.0kb upstream 26075   true Lsat_1_v8_lg_1: 84354881-84380955 Lactuca sativa
Lsat_1_v5_gn_1_70360 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 84354881-84364880 Lactuca sativa
Lsat_1_v5_gn_1_70360 10.0kb downstream 10.0kb downstream 26075   true Lsat_1_v8_lg_1: 84364881-84390955 Lactuca sativa
Lsat_1_v5_gn_1_70360 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 84380956-84390955 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474778 5263 Asterids View MSA
123740730 5271 Pentapetalae View MSA
122788844 5272 Eudicot View MSA
122041588 5273 Angiosperm View MSA
121344484 5274 Embryophyte View MSA
123427454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain