Gene : Lsat_1_v5_gn_1_71460 L. sativa V8
Defline:  (1 of 1) PTHR13343//PTHR13343:SF18 - CREG1 PROTEIN // PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-LIKE PROTEIN Genomic Order:  2314
Name:  ? Lsat_1_v5_gn_1_71460 Secondary Identifier:  ? PAC:38946322
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_71460 0.5kb upstream 0.5kb upstream 4407   true Lsat_1_v8_lg_1: 82360081-82364487 Lactuca sativa
Lsat_1_v5_gn_1_71460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 82360081-82360580 Lactuca sativa
Lsat_1_v5_gn_1_71460 0.5kb downstream 0.5kb downstream 4407   true Lsat_1_v8_lg_1: 82360581-82364987 Lactuca sativa
Lsat_1_v5_gn_1_71460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 82364488-82364987 Lactuca sativa
Lsat_1_v5_gn_1_71460 1.0kb upstream 1.0kb upstream 4907   true Lsat_1_v8_lg_1: 82359581-82364487 Lactuca sativa
Lsat_1_v5_gn_1_71460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 82359581-82360580 Lactuca sativa
Lsat_1_v5_gn_1_71460 1.0kb downstream 1.0kb downstream 4907   true Lsat_1_v8_lg_1: 82360581-82365487 Lactuca sativa
Lsat_1_v5_gn_1_71460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 82364488-82365487 Lactuca sativa
Lsat_1_v5_gn_1_71460 2.0kb upstream 2.0kb upstream 5907   true Lsat_1_v8_lg_1: 82358581-82364487 Lactuca sativa
Lsat_1_v5_gn_1_71460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 82358581-82360580 Lactuca sativa
Lsat_1_v5_gn_1_71460 2.0kb downstream 2.0kb downstream 5907   true Lsat_1_v8_lg_1: 82360581-82366487 Lactuca sativa
Lsat_1_v5_gn_1_71460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 82364488-82366487 Lactuca sativa
Lsat_1_v5_gn_1_71460 5.0kb upstream 5.0kb upstream 8907   true Lsat_1_v8_lg_1: 82355581-82364487 Lactuca sativa
Lsat_1_v5_gn_1_71460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 82355581-82360580 Lactuca sativa
Lsat_1_v5_gn_1_71460 5.0kb downstream 5.0kb downstream 8907   true Lsat_1_v8_lg_1: 82360581-82369487 Lactuca sativa
Lsat_1_v5_gn_1_71460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 82364488-82369487 Lactuca sativa
Lsat_1_v5_gn_1_71460 10.0kb upstream 10.0kb upstream 13907   true Lsat_1_v8_lg_1: 82350581-82364487 Lactuca sativa
Lsat_1_v5_gn_1_71460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 82350581-82360580 Lactuca sativa
Lsat_1_v5_gn_1_71460 10.0kb downstream 10.0kb downstream 13907   true Lsat_1_v8_lg_1: 82360581-82374487 Lactuca sativa
Lsat_1_v5_gn_1_71460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 82364488-82374487 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471261 5263 Asterids View MSA
123738942 5271 Pentapetalae View MSA
122769938 5272 Eudicot View MSA
122050575 5273 Angiosperm View MSA
121348228 5274 Embryophyte View MSA
123380781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain