Gene : Lsat_1_v5_gn_1_71321 L. sativa V8
Defline:  (1 of 1) K14317 - nuclear pore complex protein Nup214 (NUP214, CAN) Genomic Order:  2309
Name:  ? Lsat_1_v5_gn_1_71321 Secondary Identifier:  ? PAC:38943147
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_71321 0.5kb upstream 0.5kb upstream 7843   true Lsat_1_v8_lg_1: 82285579-82293421 Lactuca sativa
Lsat_1_v5_gn_1_71321 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 82292922-82293421 Lactuca sativa
Lsat_1_v5_gn_1_71321 0.5kb downstream 0.5kb downstream 7843   true Lsat_1_v8_lg_1: 82285079-82292921 Lactuca sativa
Lsat_1_v5_gn_1_71321 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 82285079-82285578 Lactuca sativa
Lsat_1_v5_gn_1_71321 1.0kb upstream 1.0kb upstream 8343   true Lsat_1_v8_lg_1: 82285579-82293921 Lactuca sativa
Lsat_1_v5_gn_1_71321 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 82292922-82293921 Lactuca sativa
Lsat_1_v5_gn_1_71321 1.0kb downstream 1.0kb downstream 8343   true Lsat_1_v8_lg_1: 82284579-82292921 Lactuca sativa
Lsat_1_v5_gn_1_71321 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 82284579-82285578 Lactuca sativa
Lsat_1_v5_gn_1_71321 2.0kb upstream 2.0kb upstream 9343   true Lsat_1_v8_lg_1: 82285579-82294921 Lactuca sativa
Lsat_1_v5_gn_1_71321 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 82292922-82294921 Lactuca sativa
Lsat_1_v5_gn_1_71321 2.0kb downstream 2.0kb downstream 9343   true Lsat_1_v8_lg_1: 82283579-82292921 Lactuca sativa
Lsat_1_v5_gn_1_71321 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 82283579-82285578 Lactuca sativa
Lsat_1_v5_gn_1_71321 5.0kb upstream 5.0kb upstream 12343   true Lsat_1_v8_lg_1: 82285579-82297921 Lactuca sativa
Lsat_1_v5_gn_1_71321 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 82292922-82297921 Lactuca sativa
Lsat_1_v5_gn_1_71321 5.0kb downstream 5.0kb downstream 12343   true Lsat_1_v8_lg_1: 82280579-82292921 Lactuca sativa
Lsat_1_v5_gn_1_71321 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 82280579-82285578 Lactuca sativa
Lsat_1_v5_gn_1_71321 10.0kb upstream 10.0kb upstream 17343   true Lsat_1_v8_lg_1: 82285579-82302921 Lactuca sativa
Lsat_1_v5_gn_1_71321 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 82292922-82302921 Lactuca sativa
Lsat_1_v5_gn_1_71321 10.0kb downstream 10.0kb downstream 17343   true Lsat_1_v8_lg_1: 82275579-82292921 Lactuca sativa
Lsat_1_v5_gn_1_71321 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 82275579-82285578 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469761 5263 Asterids View MSA
123739810 5271 Pentapetalae View MSA
122786045 5272 Eudicot View MSA
122042091 5273 Angiosperm View MSA
121347011 5274 Embryophyte View MSA
123424066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain