Gene : Lsat_1_v5_gn_1_71660 L. sativa V8
Defline:  (1 of 1) K13155 - U11/U12 small nuclear ribonucleoprotein 35 kDa protein (SNRNP35) Genomic Order:  2323
Name:  ? Lsat_1_v5_gn_1_71660 Secondary Identifier:  ? PAC:38944416
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_71660 0.5kb upstream 0.5kb upstream 3036   true Lsat_1_v8_lg_1: 82547337-82550372 Lactuca sativa
Lsat_1_v5_gn_1_71660 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 82547337-82547836 Lactuca sativa
Lsat_1_v5_gn_1_71660 0.5kb downstream 0.5kb downstream 3036   true Lsat_1_v8_lg_1: 82547837-82550872 Lactuca sativa
Lsat_1_v5_gn_1_71660 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 82550373-82550872 Lactuca sativa
Lsat_1_v5_gn_1_71660 1.0kb upstream 1.0kb upstream 3536   true Lsat_1_v8_lg_1: 82546837-82550372 Lactuca sativa
Lsat_1_v5_gn_1_71660 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 82546837-82547836 Lactuca sativa
Lsat_1_v5_gn_1_71660 1.0kb downstream 1.0kb downstream 3536   true Lsat_1_v8_lg_1: 82547837-82551372 Lactuca sativa
Lsat_1_v5_gn_1_71660 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 82550373-82551372 Lactuca sativa
Lsat_1_v5_gn_1_71660 2.0kb upstream 2.0kb upstream 4536   true Lsat_1_v8_lg_1: 82545837-82550372 Lactuca sativa
Lsat_1_v5_gn_1_71660 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 82545837-82547836 Lactuca sativa
Lsat_1_v5_gn_1_71660 2.0kb downstream 2.0kb downstream 4536   true Lsat_1_v8_lg_1: 82547837-82552372 Lactuca sativa
Lsat_1_v5_gn_1_71660 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 82550373-82552372 Lactuca sativa
Lsat_1_v5_gn_1_71660 5.0kb upstream 5.0kb upstream 7536   true Lsat_1_v8_lg_1: 82542837-82550372 Lactuca sativa
Lsat_1_v5_gn_1_71660 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 82542837-82547836 Lactuca sativa
Lsat_1_v5_gn_1_71660 5.0kb downstream 5.0kb downstream 7536   true Lsat_1_v8_lg_1: 82547837-82555372 Lactuca sativa
Lsat_1_v5_gn_1_71660 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 82550373-82555372 Lactuca sativa
Lsat_1_v5_gn_1_71660 10.0kb upstream 10.0kb upstream 12536   true Lsat_1_v8_lg_1: 82537837-82550372 Lactuca sativa
Lsat_1_v5_gn_1_71660 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 82537837-82547836 Lactuca sativa
Lsat_1_v5_gn_1_71660 10.0kb downstream 10.0kb downstream 12536   true Lsat_1_v8_lg_1: 82547837-82560372 Lactuca sativa
Lsat_1_v5_gn_1_71660 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 82550373-82560372 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466945 5263 Asterids View MSA
123739426 5271 Pentapetalae View MSA
122792874 5272 Eudicot View MSA
122049449 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351469 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain