Gene : Lsat_1_v5_gn_1_71820 L. sativa V8
Defline:  (1 of 4) PTHR13711//PTHR13711:SF202 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN // HIGH MOBILITY GROUP B PROTEIN 10-RELATED Genomic Order:  2410
Name:  ? Lsat_1_v5_gn_1_71820 Secondary Identifier:  ? PAC:38944137
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_71820 0.5kb upstream 0.5kb upstream 4539   true Lsat_1_v8_lg_1: 86956300-86960838 Lactuca sativa
Lsat_1_v5_gn_1_71820 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 86956300-86956799 Lactuca sativa
Lsat_1_v5_gn_1_71820 0.5kb downstream 0.5kb downstream 4539   true Lsat_1_v8_lg_1: 86956800-86961338 Lactuca sativa
Lsat_1_v5_gn_1_71820 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 86960839-86961338 Lactuca sativa
Lsat_1_v5_gn_1_71820 1.0kb upstream 1.0kb upstream 5039   true Lsat_1_v8_lg_1: 86955800-86960838 Lactuca sativa
Lsat_1_v5_gn_1_71820 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 86955800-86956799 Lactuca sativa
Lsat_1_v5_gn_1_71820 1.0kb downstream 1.0kb downstream 5039   true Lsat_1_v8_lg_1: 86956800-86961838 Lactuca sativa
Lsat_1_v5_gn_1_71820 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 86960839-86961838 Lactuca sativa
Lsat_1_v5_gn_1_71820 2.0kb upstream 2.0kb upstream 6039   true Lsat_1_v8_lg_1: 86954800-86960838 Lactuca sativa
Lsat_1_v5_gn_1_71820 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 86954800-86956799 Lactuca sativa
Lsat_1_v5_gn_1_71820 2.0kb downstream 2.0kb downstream 6039   true Lsat_1_v8_lg_1: 86956800-86962838 Lactuca sativa
Lsat_1_v5_gn_1_71820 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 86960839-86962838 Lactuca sativa
Lsat_1_v5_gn_1_71820 5.0kb upstream 5.0kb upstream 9039   true Lsat_1_v8_lg_1: 86951800-86960838 Lactuca sativa
Lsat_1_v5_gn_1_71820 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 86951800-86956799 Lactuca sativa
Lsat_1_v5_gn_1_71820 5.0kb downstream 5.0kb downstream 9039   true Lsat_1_v8_lg_1: 86956800-86965838 Lactuca sativa
Lsat_1_v5_gn_1_71820 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 86960839-86965838 Lactuca sativa
Lsat_1_v5_gn_1_71820 10.0kb upstream 10.0kb upstream 14039   true Lsat_1_v8_lg_1: 86946800-86960838 Lactuca sativa
Lsat_1_v5_gn_1_71820 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 86946800-86956799 Lactuca sativa
Lsat_1_v5_gn_1_71820 10.0kb downstream 10.0kb downstream 14039   true Lsat_1_v8_lg_1: 86956800-86970838 Lactuca sativa
Lsat_1_v5_gn_1_71820 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 86960839-86970838 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475648 5263 Asterids View MSA
123745117 5271 Pentapetalae View MSA
122793766 5272 Eudicot View MSA
122048952 5273 Angiosperm View MSA
121343849 5274 Embryophyte View MSA
123424352 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain