Gene : Lsat_1_v5_gn_1_62120 L. sativa V8
Defline:  (1 of 1) 2.5.1.27//2.5.1.75 - Adenylate dimethylallyltransferase (AMP-dependent) / Isopentenyltransferase // tRNA dimethylallyltransferase / tRNA prenyltransferase Genomic Order:  2057
Name:  ? Lsat_1_v5_gn_1_62120 Secondary Identifier:  ? PAC:38944385
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-2681 Lactuca sativa pathologic  
Lsativa PWY-2781 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_62120 0.5kb upstream 0.5kb upstream 3086   true Lsat_1_v8_lg_1: 71447587-71450672 Lactuca sativa
Lsat_1_v5_gn_1_62120 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 71447587-71448086 Lactuca sativa
Lsat_1_v5_gn_1_62120 0.5kb downstream 0.5kb downstream 3086   true Lsat_1_v8_lg_1: 71448087-71451172 Lactuca sativa
Lsat_1_v5_gn_1_62120 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 71450673-71451172 Lactuca sativa
Lsat_1_v5_gn_1_62120 1.0kb upstream 1.0kb upstream 3586   true Lsat_1_v8_lg_1: 71447087-71450672 Lactuca sativa
Lsat_1_v5_gn_1_62120 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 71447087-71448086 Lactuca sativa
Lsat_1_v5_gn_1_62120 1.0kb downstream 1.0kb downstream 3586   true Lsat_1_v8_lg_1: 71448087-71451672 Lactuca sativa
Lsat_1_v5_gn_1_62120 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 71450673-71451672 Lactuca sativa
Lsat_1_v5_gn_1_62120 2.0kb upstream 2.0kb upstream 4586   true Lsat_1_v8_lg_1: 71446087-71450672 Lactuca sativa
Lsat_1_v5_gn_1_62120 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 71446087-71448086 Lactuca sativa
Lsat_1_v5_gn_1_62120 2.0kb downstream 2.0kb downstream 4586   true Lsat_1_v8_lg_1: 71448087-71452672 Lactuca sativa
Lsat_1_v5_gn_1_62120 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 71450673-71452672 Lactuca sativa
Lsat_1_v5_gn_1_62120 5.0kb upstream 5.0kb upstream 7586   true Lsat_1_v8_lg_1: 71443087-71450672 Lactuca sativa
Lsat_1_v5_gn_1_62120 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 71443087-71448086 Lactuca sativa
Lsat_1_v5_gn_1_62120 5.0kb downstream 5.0kb downstream 7586   true Lsat_1_v8_lg_1: 71448087-71455672 Lactuca sativa
Lsat_1_v5_gn_1_62120 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 71450673-71455672 Lactuca sativa
Lsat_1_v5_gn_1_62120 10.0kb upstream 10.0kb upstream 12586   true Lsat_1_v8_lg_1: 71438087-71450672 Lactuca sativa
Lsat_1_v5_gn_1_62120 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 71438087-71448086 Lactuca sativa
Lsat_1_v5_gn_1_62120 10.0kb downstream 10.0kb downstream 12586   true Lsat_1_v8_lg_1: 71448087-71460672 Lactuca sativa
Lsat_1_v5_gn_1_62120 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 71450673-71460672 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475007 5263 Asterids View MSA
123740850 5271 Pentapetalae View MSA
122786758 5272 Eudicot View MSA
122043118 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain