Gene : Lsat_1_v5_gn_1_64640 L. sativa V8
Defline:  (1 of 1) PTHR31945//PTHR31945:SF17 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR Genomic Order:  2101
Name:  ? Lsat_1_v5_gn_1_64640 Secondary Identifier:  ? PAC:38943240
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_64640 0.5kb upstream 0.5kb upstream 2086   true Lsat_1_v8_lg_1: 72883959-72886044 Lactuca sativa
Lsat_1_v5_gn_1_64640 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 72885545-72886044 Lactuca sativa
Lsat_1_v5_gn_1_64640 0.5kb downstream 0.5kb downstream 2086   true Lsat_1_v8_lg_1: 72883459-72885544 Lactuca sativa
Lsat_1_v5_gn_1_64640 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 72883459-72883958 Lactuca sativa
Lsat_1_v5_gn_1_64640 1.0kb upstream 1.0kb upstream 2586   true Lsat_1_v8_lg_1: 72883959-72886544 Lactuca sativa
Lsat_1_v5_gn_1_64640 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 72885545-72886544 Lactuca sativa
Lsat_1_v5_gn_1_64640 1.0kb downstream 1.0kb downstream 2586   true Lsat_1_v8_lg_1: 72882959-72885544 Lactuca sativa
Lsat_1_v5_gn_1_64640 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 72882959-72883958 Lactuca sativa
Lsat_1_v5_gn_1_64640 2.0kb upstream 2.0kb upstream 3586   true Lsat_1_v8_lg_1: 72883959-72887544 Lactuca sativa
Lsat_1_v5_gn_1_64640 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 72885545-72887544 Lactuca sativa
Lsat_1_v5_gn_1_64640 2.0kb downstream 2.0kb downstream 3586   true Lsat_1_v8_lg_1: 72881959-72885544 Lactuca sativa
Lsat_1_v5_gn_1_64640 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 72881959-72883958 Lactuca sativa
Lsat_1_v5_gn_1_64640 5.0kb upstream 5.0kb upstream 6586   true Lsat_1_v8_lg_1: 72883959-72890544 Lactuca sativa
Lsat_1_v5_gn_1_64640 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 72885545-72890544 Lactuca sativa
Lsat_1_v5_gn_1_64640 5.0kb downstream 5.0kb downstream 6586   true Lsat_1_v8_lg_1: 72878959-72885544 Lactuca sativa
Lsat_1_v5_gn_1_64640 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 72878959-72883958 Lactuca sativa
Lsat_1_v5_gn_1_64640 10.0kb upstream 10.0kb upstream 11586   true Lsat_1_v8_lg_1: 72883959-72895544 Lactuca sativa
Lsat_1_v5_gn_1_64640 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 72885545-72895544 Lactuca sativa
Lsat_1_v5_gn_1_64640 10.0kb downstream 10.0kb downstream 11586   true Lsat_1_v8_lg_1: 72873959-72885544 Lactuca sativa
Lsat_1_v5_gn_1_64640 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 72873959-72883958 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475571 5263 Asterids View MSA
123751108 5271 Pentapetalae View MSA
122786692 5272 Eudicot View MSA
122047827 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain