Gene : Lsat_1_v5_gn_1_64940 L. sativa V8
Defline:  (1 of 4) PTHR23024//PTHR23024:SF135 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES // SUBFAMILY NOT NAMED Genomic Order:  2088
Name:  ? Lsat_1_v5_gn_1_64940 Secondary Identifier:  ? PAC:38947355
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6303 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_64940 0.5kb upstream 0.5kb upstream 1594   true Lsat_1_v8_lg_1: 72695800-72697393 Lactuca sativa
Lsat_1_v5_gn_1_64940 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 72696894-72697393 Lactuca sativa
Lsat_1_v5_gn_1_64940 0.5kb downstream 0.5kb downstream 1594   true Lsat_1_v8_lg_1: 72695300-72696893 Lactuca sativa
Lsat_1_v5_gn_1_64940 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 72695300-72695799 Lactuca sativa
Lsat_1_v5_gn_1_64940 1.0kb upstream 1.0kb upstream 2094   true Lsat_1_v8_lg_1: 72695800-72697893 Lactuca sativa
Lsat_1_v5_gn_1_64940 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 72696894-72697893 Lactuca sativa
Lsat_1_v5_gn_1_64940 1.0kb downstream 1.0kb downstream 2094   true Lsat_1_v8_lg_1: 72694800-72696893 Lactuca sativa
Lsat_1_v5_gn_1_64940 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 72694800-72695799 Lactuca sativa
Lsat_1_v5_gn_1_64940 2.0kb upstream 2.0kb upstream 3094   true Lsat_1_v8_lg_1: 72695800-72698893 Lactuca sativa
Lsat_1_v5_gn_1_64940 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 72696894-72698893 Lactuca sativa
Lsat_1_v5_gn_1_64940 2.0kb downstream 2.0kb downstream 3094   true Lsat_1_v8_lg_1: 72693800-72696893 Lactuca sativa
Lsat_1_v5_gn_1_64940 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 72693800-72695799 Lactuca sativa
Lsat_1_v5_gn_1_64940 5.0kb upstream 5.0kb upstream 6094   true Lsat_1_v8_lg_1: 72695800-72701893 Lactuca sativa
Lsat_1_v5_gn_1_64940 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 72696894-72701893 Lactuca sativa
Lsat_1_v5_gn_1_64940 5.0kb downstream 5.0kb downstream 6094   true Lsat_1_v8_lg_1: 72690800-72696893 Lactuca sativa
Lsat_1_v5_gn_1_64940 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 72690800-72695799 Lactuca sativa
Lsat_1_v5_gn_1_64940 10.0kb upstream 10.0kb upstream 11094   true Lsat_1_v8_lg_1: 72695800-72706893 Lactuca sativa
Lsat_1_v5_gn_1_64940 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 72696894-72706893 Lactuca sativa
Lsat_1_v5_gn_1_64940 10.0kb downstream 10.0kb downstream 11094   true Lsat_1_v8_lg_1: 72685800-72696893 Lactuca sativa
Lsat_1_v5_gn_1_64940 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 72685800-72695799 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469023 5263 Asterids View MSA
123742376 5271 Pentapetalae View MSA
122794842 5272 Eudicot View MSA
122048424 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain