Gene : Lsat_1_v5_gn_1_92880 L. sativa V8
Defline:  (1 of 2) PTHR11003//PTHR11003:SF126 - POTASSIUM CHANNEL, SUBFAMILY K // POTASSIUM INWARD RECTIFIER (KIR)-LIKE CHANNEL 3-RELATED Genomic Order:  3012
Name:  ? Lsat_1_v5_gn_1_92880 Secondary Identifier:  ? PAC:38948381
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_92880 0.5kb upstream 0.5kb upstream 2975   true Lsat_1_v8_lg_1: 122266086-122269060 Lactuca sativa
Lsat_1_v5_gn_1_92880 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 122266086-122266585 Lactuca sativa
Lsat_1_v5_gn_1_92880 0.5kb downstream 0.5kb downstream 2975   true Lsat_1_v8_lg_1: 122266586-122269560 Lactuca sativa
Lsat_1_v5_gn_1_92880 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 122269061-122269560 Lactuca sativa
Lsat_1_v5_gn_1_92880 1.0kb upstream 1.0kb upstream 3475   true Lsat_1_v8_lg_1: 122265586-122269060 Lactuca sativa
Lsat_1_v5_gn_1_92880 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 122265586-122266585 Lactuca sativa
Lsat_1_v5_gn_1_92880 1.0kb downstream 1.0kb downstream 3475   true Lsat_1_v8_lg_1: 122266586-122270060 Lactuca sativa
Lsat_1_v5_gn_1_92880 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 122269061-122270060 Lactuca sativa
Lsat_1_v5_gn_1_92880 2.0kb upstream 2.0kb upstream 4475   true Lsat_1_v8_lg_1: 122264586-122269060 Lactuca sativa
Lsat_1_v5_gn_1_92880 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 122264586-122266585 Lactuca sativa
Lsat_1_v5_gn_1_92880 2.0kb downstream 2.0kb downstream 4475   true Lsat_1_v8_lg_1: 122266586-122271060 Lactuca sativa
Lsat_1_v5_gn_1_92880 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 122269061-122271060 Lactuca sativa
Lsat_1_v5_gn_1_92880 5.0kb upstream 5.0kb upstream 7475   true Lsat_1_v8_lg_1: 122261586-122269060 Lactuca sativa
Lsat_1_v5_gn_1_92880 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 122261586-122266585 Lactuca sativa
Lsat_1_v5_gn_1_92880 5.0kb downstream 5.0kb downstream 7475   true Lsat_1_v8_lg_1: 122266586-122274060 Lactuca sativa
Lsat_1_v5_gn_1_92880 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 122269061-122274060 Lactuca sativa
Lsat_1_v5_gn_1_92880 10.0kb upstream 10.0kb upstream 12475   true Lsat_1_v8_lg_1: 122256586-122269060 Lactuca sativa
Lsat_1_v5_gn_1_92880 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 122256586-122266585 Lactuca sativa
Lsat_1_v5_gn_1_92880 10.0kb downstream 10.0kb downstream 12475   true Lsat_1_v8_lg_1: 122266586-122279060 Lactuca sativa
Lsat_1_v5_gn_1_92880 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 122269061-122279060 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471092 5263 Asterids View MSA
123750198 5271 Pentapetalae View MSA
122794614 5272 Eudicot View MSA
122044650 5273 Angiosperm View MSA
121350558 5274 Embryophyte View MSA
123381790 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain