Gene : Lsat_1_v5_gn_1_95580 L. sativa V8
Defline:  (1 of 1) PTHR32295:SF33 - PROTEIN IQ-DOMAIN 21 Genomic Order:  3087
Name:  ? Lsat_1_v5_gn_1_95580 Secondary Identifier:  ? PAC:38942520
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_95580 0.5kb upstream 0.5kb upstream 4873   true Lsat_1_v8_lg_1: 127126310-127131182 Lactuca sativa
Lsat_1_v5_gn_1_95580 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 127130683-127131182 Lactuca sativa
Lsat_1_v5_gn_1_95580 0.5kb downstream 0.5kb downstream 4873   true Lsat_1_v8_lg_1: 127125810-127130682 Lactuca sativa
Lsat_1_v5_gn_1_95580 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 127125810-127126309 Lactuca sativa
Lsat_1_v5_gn_1_95580 1.0kb upstream 1.0kb upstream 5373   true Lsat_1_v8_lg_1: 127126310-127131682 Lactuca sativa
Lsat_1_v5_gn_1_95580 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 127130683-127131682 Lactuca sativa
Lsat_1_v5_gn_1_95580 1.0kb downstream 1.0kb downstream 5373   true Lsat_1_v8_lg_1: 127125310-127130682 Lactuca sativa
Lsat_1_v5_gn_1_95580 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 127125310-127126309 Lactuca sativa
Lsat_1_v5_gn_1_95580 2.0kb upstream 2.0kb upstream 6373   true Lsat_1_v8_lg_1: 127126310-127132682 Lactuca sativa
Lsat_1_v5_gn_1_95580 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 127130683-127132682 Lactuca sativa
Lsat_1_v5_gn_1_95580 2.0kb downstream 2.0kb downstream 6373   true Lsat_1_v8_lg_1: 127124310-127130682 Lactuca sativa
Lsat_1_v5_gn_1_95580 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 127124310-127126309 Lactuca sativa
Lsat_1_v5_gn_1_95580 5.0kb upstream 5.0kb upstream 9373   true Lsat_1_v8_lg_1: 127126310-127135682 Lactuca sativa
Lsat_1_v5_gn_1_95580 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 127130683-127135682 Lactuca sativa
Lsat_1_v5_gn_1_95580 5.0kb downstream 5.0kb downstream 9373   true Lsat_1_v8_lg_1: 127121310-127130682 Lactuca sativa
Lsat_1_v5_gn_1_95580 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 127121310-127126309 Lactuca sativa
Lsat_1_v5_gn_1_95580 10.0kb upstream 10.0kb upstream 14373   true Lsat_1_v8_lg_1: 127126310-127140682 Lactuca sativa
Lsat_1_v5_gn_1_95580 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 127130683-127140682 Lactuca sativa
Lsat_1_v5_gn_1_95580 10.0kb downstream 10.0kb downstream 14373   true Lsat_1_v8_lg_1: 127116310-127130682 Lactuca sativa
Lsat_1_v5_gn_1_95580 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 127116310-127126309 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469169 5263 Asterids View MSA
123748738 5271 Pentapetalae View MSA
122793664 5272 Eudicot View MSA
122049723 5273 Angiosperm View MSA
121311558 5274 Embryophyte View MSA
123348838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain