Gene : Lsat_1_v5_gn_1_99961 L. sativa V8
Defline:  (1 of 4) K00006 - glycerol-3-phosphate dehydrogenase (NAD+) (GPD1) Genomic Order:  3182
Name:  ? Lsat_1_v5_gn_1_99961 Secondary Identifier:  ? PAC:38944195
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6118 Lactuca sativa pathologic  
Lsativa PWY-7411 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_99961 0.5kb upstream 0.5kb upstream 3797   true Lsat_1_v8_lg_1: 135019990-135023786 Lactuca sativa
Lsat_1_v5_gn_1_99961 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 135019990-135020489 Lactuca sativa
Lsat_1_v5_gn_1_99961 0.5kb downstream 0.5kb downstream 3797   true Lsat_1_v8_lg_1: 135020490-135024286 Lactuca sativa
Lsat_1_v5_gn_1_99961 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 135023787-135024286 Lactuca sativa
Lsat_1_v5_gn_1_99961 1.0kb upstream 1.0kb upstream 4297   true Lsat_1_v8_lg_1: 135019490-135023786 Lactuca sativa
Lsat_1_v5_gn_1_99961 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 135019490-135020489 Lactuca sativa
Lsat_1_v5_gn_1_99961 1.0kb downstream 1.0kb downstream 4297   true Lsat_1_v8_lg_1: 135020490-135024786 Lactuca sativa
Lsat_1_v5_gn_1_99961 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 135023787-135024786 Lactuca sativa
Lsat_1_v5_gn_1_99961 2.0kb upstream 2.0kb upstream 5297   true Lsat_1_v8_lg_1: 135018490-135023786 Lactuca sativa
Lsat_1_v5_gn_1_99961 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 135018490-135020489 Lactuca sativa
Lsat_1_v5_gn_1_99961 2.0kb downstream 2.0kb downstream 5297   true Lsat_1_v8_lg_1: 135020490-135025786 Lactuca sativa
Lsat_1_v5_gn_1_99961 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 135023787-135025786 Lactuca sativa
Lsat_1_v5_gn_1_99961 5.0kb upstream 5.0kb upstream 8297   true Lsat_1_v8_lg_1: 135015490-135023786 Lactuca sativa
Lsat_1_v5_gn_1_99961 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 135015490-135020489 Lactuca sativa
Lsat_1_v5_gn_1_99961 5.0kb downstream 5.0kb downstream 8297   true Lsat_1_v8_lg_1: 135020490-135028786 Lactuca sativa
Lsat_1_v5_gn_1_99961 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 135023787-135028786 Lactuca sativa
Lsat_1_v5_gn_1_99961 10.0kb upstream 10.0kb upstream 13297   true Lsat_1_v8_lg_1: 135010490-135023786 Lactuca sativa
Lsat_1_v5_gn_1_99961 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 135010490-135020489 Lactuca sativa
Lsat_1_v5_gn_1_99961 10.0kb downstream 10.0kb downstream 13297   true Lsat_1_v8_lg_1: 135020490-135033786 Lactuca sativa
Lsat_1_v5_gn_1_99961 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 135023787-135033786 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467006 5263 Asterids View MSA
123738520 5271 Pentapetalae View MSA
122790520 5272 Eudicot View MSA
122046820 5273 Angiosperm View MSA
121349677 5274 Embryophyte View MSA
123381397 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain