Gene : Lsat_1_v5_gn_2_100181 L. sativa V8
Defline:  (1 of 5) PTHR31384//PTHR31384:SF27 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 10-RELATED Genomic Order:  2831
Name:  ? Lsat_1_v5_gn_2_100181 Secondary Identifier:  ? PAC:38961807
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_100181 0.5kb upstream 0.5kb upstream 3677   true Lsat_1_v8_lg_2: 176445051-176448727 Lactuca sativa
Lsat_1_v5_gn_2_100181 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 176445051-176445550 Lactuca sativa
Lsat_1_v5_gn_2_100181 0.5kb downstream 0.5kb downstream 3677   true Lsat_1_v8_lg_2: 176445551-176449227 Lactuca sativa
Lsat_1_v5_gn_2_100181 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 176448728-176449227 Lactuca sativa
Lsat_1_v5_gn_2_100181 1.0kb upstream 1.0kb upstream 4177   true Lsat_1_v8_lg_2: 176444551-176448727 Lactuca sativa
Lsat_1_v5_gn_2_100181 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 176444551-176445550 Lactuca sativa
Lsat_1_v5_gn_2_100181 1.0kb downstream 1.0kb downstream 4177   true Lsat_1_v8_lg_2: 176445551-176449727 Lactuca sativa
Lsat_1_v5_gn_2_100181 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 176448728-176449727 Lactuca sativa
Lsat_1_v5_gn_2_100181 2.0kb upstream 2.0kb upstream 5177   true Lsat_1_v8_lg_2: 176443551-176448727 Lactuca sativa
Lsat_1_v5_gn_2_100181 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 176443551-176445550 Lactuca sativa
Lsat_1_v5_gn_2_100181 2.0kb downstream 2.0kb downstream 5177   true Lsat_1_v8_lg_2: 176445551-176450727 Lactuca sativa
Lsat_1_v5_gn_2_100181 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 176448728-176450727 Lactuca sativa
Lsat_1_v5_gn_2_100181 5.0kb upstream 5.0kb upstream 8177   true Lsat_1_v8_lg_2: 176440551-176448727 Lactuca sativa
Lsat_1_v5_gn_2_100181 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 176440551-176445550 Lactuca sativa
Lsat_1_v5_gn_2_100181 5.0kb downstream 5.0kb downstream 8177   true Lsat_1_v8_lg_2: 176445551-176453727 Lactuca sativa
Lsat_1_v5_gn_2_100181 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 176448728-176453727 Lactuca sativa
Lsat_1_v5_gn_2_100181 10.0kb upstream 10.0kb upstream 13177   true Lsat_1_v8_lg_2: 176435551-176448727 Lactuca sativa
Lsat_1_v5_gn_2_100181 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 176435551-176445550 Lactuca sativa
Lsat_1_v5_gn_2_100181 10.0kb downstream 10.0kb downstream 13177   true Lsat_1_v8_lg_2: 176445551-176458727 Lactuca sativa
Lsat_1_v5_gn_2_100181 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 176448728-176458727 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478252 5263 Asterids View MSA
123753762 5271 Pentapetalae View MSA
122789105 5272 Eudicot View MSA
122049915 5273 Angiosperm View MSA
121351445 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain