Gene : Lsat_1_v5_gn_2_101461 L. sativa V8
Defline:  (1 of 2) PTHR11909:SF146 - CASEIN KINASE-LIKE PROTEIN Genomic Order:  2912
Name:  ? Lsat_1_v5_gn_2_101461 Secondary Identifier:  ? PAC:38960198
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_101461 0.5kb upstream 0.5kb upstream 4999   true Lsat_1_v8_lg_2: 179482732-179487730 Lactuca sativa
Lsat_1_v5_gn_2_101461 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 179487231-179487730 Lactuca sativa
Lsat_1_v5_gn_2_101461 0.5kb downstream 0.5kb downstream 4999   true Lsat_1_v8_lg_2: 179482232-179487230 Lactuca sativa
Lsat_1_v5_gn_2_101461 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 179482232-179482731 Lactuca sativa
Lsat_1_v5_gn_2_101461 1.0kb upstream 1.0kb upstream 5499   true Lsat_1_v8_lg_2: 179482732-179488230 Lactuca sativa
Lsat_1_v5_gn_2_101461 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 179487231-179488230 Lactuca sativa
Lsat_1_v5_gn_2_101461 1.0kb downstream 1.0kb downstream 5499   true Lsat_1_v8_lg_2: 179481732-179487230 Lactuca sativa
Lsat_1_v5_gn_2_101461 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 179481732-179482731 Lactuca sativa
Lsat_1_v5_gn_2_101461 2.0kb upstream 2.0kb upstream 6499   true Lsat_1_v8_lg_2: 179482732-179489230 Lactuca sativa
Lsat_1_v5_gn_2_101461 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 179487231-179489230 Lactuca sativa
Lsat_1_v5_gn_2_101461 2.0kb downstream 2.0kb downstream 6499   true Lsat_1_v8_lg_2: 179480732-179487230 Lactuca sativa
Lsat_1_v5_gn_2_101461 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 179480732-179482731 Lactuca sativa
Lsat_1_v5_gn_2_101461 5.0kb upstream 5.0kb upstream 9499   true Lsat_1_v8_lg_2: 179482732-179492230 Lactuca sativa
Lsat_1_v5_gn_2_101461 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 179487231-179492230 Lactuca sativa
Lsat_1_v5_gn_2_101461 5.0kb downstream 5.0kb downstream 9499   true Lsat_1_v8_lg_2: 179477732-179487230 Lactuca sativa
Lsat_1_v5_gn_2_101461 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 179477732-179482731 Lactuca sativa
Lsat_1_v5_gn_2_101461 10.0kb upstream 10.0kb upstream 14499   true Lsat_1_v8_lg_2: 179482732-179497230 Lactuca sativa
Lsat_1_v5_gn_2_101461 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 179487231-179497230 Lactuca sativa
Lsat_1_v5_gn_2_101461 10.0kb downstream 10.0kb downstream 14499   true Lsat_1_v8_lg_2: 179472732-179487230 Lactuca sativa
Lsat_1_v5_gn_2_101461 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 179472732-179482731 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479266 5263 Asterids View MSA
123746473 5271 Pentapetalae View MSA
122796123 5272 Eudicot View MSA
122047943 5273 Angiosperm View MSA
121348190 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain