Gene : Lsat_1_v5_gn_2_101380 L. sativa V8
Defline:  (1 of 200) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2908
Name:  ? Lsat_1_v5_gn_2_101380 Secondary Identifier:  ? PAC:38960667
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_101380 0.5kb upstream 0.5kb upstream 2675   true Lsat_1_v8_lg_2: 179462295-179464969 Lactuca sativa
Lsat_1_v5_gn_2_101380 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 179462295-179462794 Lactuca sativa
Lsat_1_v5_gn_2_101380 0.5kb downstream 0.5kb downstream 2675   true Lsat_1_v8_lg_2: 179462795-179465469 Lactuca sativa
Lsat_1_v5_gn_2_101380 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 179464970-179465469 Lactuca sativa
Lsat_1_v5_gn_2_101380 1.0kb upstream 1.0kb upstream 3175   true Lsat_1_v8_lg_2: 179461795-179464969 Lactuca sativa
Lsat_1_v5_gn_2_101380 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 179461795-179462794 Lactuca sativa
Lsat_1_v5_gn_2_101380 1.0kb downstream 1.0kb downstream 3175   true Lsat_1_v8_lg_2: 179462795-179465969 Lactuca sativa
Lsat_1_v5_gn_2_101380 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 179464970-179465969 Lactuca sativa
Lsat_1_v5_gn_2_101380 2.0kb upstream 2.0kb upstream 4175   true Lsat_1_v8_lg_2: 179460795-179464969 Lactuca sativa
Lsat_1_v5_gn_2_101380 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 179460795-179462794 Lactuca sativa
Lsat_1_v5_gn_2_101380 2.0kb downstream 2.0kb downstream 4175   true Lsat_1_v8_lg_2: 179462795-179466969 Lactuca sativa
Lsat_1_v5_gn_2_101380 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 179464970-179466969 Lactuca sativa
Lsat_1_v5_gn_2_101380 5.0kb upstream 5.0kb upstream 7175   true Lsat_1_v8_lg_2: 179457795-179464969 Lactuca sativa
Lsat_1_v5_gn_2_101380 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 179457795-179462794 Lactuca sativa
Lsat_1_v5_gn_2_101380 5.0kb downstream 5.0kb downstream 7175   true Lsat_1_v8_lg_2: 179462795-179469969 Lactuca sativa
Lsat_1_v5_gn_2_101380 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 179464970-179469969 Lactuca sativa
Lsat_1_v5_gn_2_101380 10.0kb upstream 10.0kb upstream 12175   true Lsat_1_v8_lg_2: 179452795-179464969 Lactuca sativa
Lsat_1_v5_gn_2_101380 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 179452795-179462794 Lactuca sativa
Lsat_1_v5_gn_2_101380 10.0kb downstream 10.0kb downstream 12175   true Lsat_1_v8_lg_2: 179462795-179474969 Lactuca sativa
Lsat_1_v5_gn_2_101380 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 179464970-179474969 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026168 5273 Angiosperm View MSA
121480854 5263 Asterids View MSA
123739079 5271 Pentapetalae View MSA
122791557 5272 Eudicot View MSA
121296211 5274 Embryophyte View MSA
123334413 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain