Gene : Lsat_1_v5_gn_2_101300 L. sativa V8
Defline:  (1 of 3) PTHR12741//PTHR12741:SF21 - LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 // CALLOSE SYNTHASE 3 Genomic Order:  2906
Name:  ? Lsat_1_v5_gn_2_101300 Secondary Identifier:  ? PAC:38959463
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6773 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_101300 0.5kb upstream 0.5kb upstream 10193   true Lsat_1_v8_lg_2: 179426213-179436405 Lactuca sativa
Lsat_1_v5_gn_2_101300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 179426213-179426712 Lactuca sativa
Lsat_1_v5_gn_2_101300 0.5kb downstream 0.5kb downstream 10193   true Lsat_1_v8_lg_2: 179426713-179436905 Lactuca sativa
Lsat_1_v5_gn_2_101300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 179436406-179436905 Lactuca sativa
Lsat_1_v5_gn_2_101300 1.0kb upstream 1.0kb upstream 10693   true Lsat_1_v8_lg_2: 179425713-179436405 Lactuca sativa
Lsat_1_v5_gn_2_101300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 179425713-179426712 Lactuca sativa
Lsat_1_v5_gn_2_101300 1.0kb downstream 1.0kb downstream 10693   true Lsat_1_v8_lg_2: 179426713-179437405 Lactuca sativa
Lsat_1_v5_gn_2_101300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 179436406-179437405 Lactuca sativa
Lsat_1_v5_gn_2_101300 2.0kb upstream 2.0kb upstream 11693   true Lsat_1_v8_lg_2: 179424713-179436405 Lactuca sativa
Lsat_1_v5_gn_2_101300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 179424713-179426712 Lactuca sativa
Lsat_1_v5_gn_2_101300 2.0kb downstream 2.0kb downstream 11693   true Lsat_1_v8_lg_2: 179426713-179438405 Lactuca sativa
Lsat_1_v5_gn_2_101300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 179436406-179438405 Lactuca sativa
Lsat_1_v5_gn_2_101300 5.0kb upstream 5.0kb upstream 14693   true Lsat_1_v8_lg_2: 179421713-179436405 Lactuca sativa
Lsat_1_v5_gn_2_101300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 179421713-179426712 Lactuca sativa
Lsat_1_v5_gn_2_101300 5.0kb downstream 5.0kb downstream 14693   true Lsat_1_v8_lg_2: 179426713-179441405 Lactuca sativa
Lsat_1_v5_gn_2_101300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 179436406-179441405 Lactuca sativa
Lsat_1_v5_gn_2_101300 10.0kb upstream 10.0kb upstream 19693   true Lsat_1_v8_lg_2: 179416713-179436405 Lactuca sativa
Lsat_1_v5_gn_2_101300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 179416713-179426712 Lactuca sativa
Lsat_1_v5_gn_2_101300 10.0kb downstream 10.0kb downstream 19693   true Lsat_1_v8_lg_2: 179426713-179446405 Lactuca sativa
Lsat_1_v5_gn_2_101300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 179436406-179446405 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473559 5263 Asterids View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain