Gene : Lsat_1_v5_gn_2_102720 L. sativa V8
Defline:  (1 of 2) PTHR12419//PTHR12419:SF14 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2992
Name:  ? Lsat_1_v5_gn_2_102720 Secondary Identifier:  ? PAC:38959305
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_102720 0.5kb upstream 0.5kb upstream 2627   true Lsat_1_v8_lg_2: 181409382-181412008 Lactuca sativa
Lsat_1_v5_gn_2_102720 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 181411509-181412008 Lactuca sativa
Lsat_1_v5_gn_2_102720 0.5kb downstream 0.5kb downstream 2627   true Lsat_1_v8_lg_2: 181408882-181411508 Lactuca sativa
Lsat_1_v5_gn_2_102720 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 181408882-181409381 Lactuca sativa
Lsat_1_v5_gn_2_102720 1.0kb upstream 1.0kb upstream 3127   true Lsat_1_v8_lg_2: 181409382-181412508 Lactuca sativa
Lsat_1_v5_gn_2_102720 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 181411509-181412508 Lactuca sativa
Lsat_1_v5_gn_2_102720 1.0kb downstream 1.0kb downstream 3127   true Lsat_1_v8_lg_2: 181408382-181411508 Lactuca sativa
Lsat_1_v5_gn_2_102720 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 181408382-181409381 Lactuca sativa
Lsat_1_v5_gn_2_102720 2.0kb upstream 2.0kb upstream 4127   true Lsat_1_v8_lg_2: 181409382-181413508 Lactuca sativa
Lsat_1_v5_gn_2_102720 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 181411509-181413508 Lactuca sativa
Lsat_1_v5_gn_2_102720 2.0kb downstream 2.0kb downstream 4127   true Lsat_1_v8_lg_2: 181407382-181411508 Lactuca sativa
Lsat_1_v5_gn_2_102720 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 181407382-181409381 Lactuca sativa
Lsat_1_v5_gn_2_102720 5.0kb upstream 5.0kb upstream 7127   true Lsat_1_v8_lg_2: 181409382-181416508 Lactuca sativa
Lsat_1_v5_gn_2_102720 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 181411509-181416508 Lactuca sativa
Lsat_1_v5_gn_2_102720 5.0kb downstream 5.0kb downstream 7127   true Lsat_1_v8_lg_2: 181404382-181411508 Lactuca sativa
Lsat_1_v5_gn_2_102720 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 181404382-181409381 Lactuca sativa
Lsat_1_v5_gn_2_102720 10.0kb upstream 10.0kb upstream 12127   true Lsat_1_v8_lg_2: 181409382-181421508 Lactuca sativa
Lsat_1_v5_gn_2_102720 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 181411509-181421508 Lactuca sativa
Lsat_1_v5_gn_2_102720 10.0kb downstream 10.0kb downstream 12127   true Lsat_1_v8_lg_2: 181399382-181411508 Lactuca sativa
Lsat_1_v5_gn_2_102720 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 181399382-181409381 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466324 5263 Asterids View MSA
123749661 5271 Pentapetalae View MSA
122794711 5272 Eudicot View MSA
122048756 5273 Angiosperm View MSA
121349238 5274 Embryophyte View MSA
123428485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain