Gene : Lsat_1_v5_gn_2_104420 L. sativa V8
Defline:  (1 of 2) 2.1.1.95 - Tocopherol O-methyltransferase Genomic Order:  3031
Name:  ? Lsat_1_v5_gn_2_104420 Secondary Identifier:  ? PAC:38961168
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-1422 Lactuca sativa pathologic  
Lsativa PWY-7436 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_104420 0.5kb upstream 0.5kb upstream 2893   true Lsat_1_v8_lg_2: 182880237-182883129 Lactuca sativa
Lsat_1_v5_gn_2_104420 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 182882630-182883129 Lactuca sativa
Lsat_1_v5_gn_2_104420 0.5kb downstream 0.5kb downstream 2893   true Lsat_1_v8_lg_2: 182879737-182882629 Lactuca sativa
Lsat_1_v5_gn_2_104420 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 182879737-182880236 Lactuca sativa
Lsat_1_v5_gn_2_104420 1.0kb upstream 1.0kb upstream 3393   true Lsat_1_v8_lg_2: 182880237-182883629 Lactuca sativa
Lsat_1_v5_gn_2_104420 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 182882630-182883629 Lactuca sativa
Lsat_1_v5_gn_2_104420 1.0kb downstream 1.0kb downstream 3393   true Lsat_1_v8_lg_2: 182879237-182882629 Lactuca sativa
Lsat_1_v5_gn_2_104420 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 182879237-182880236 Lactuca sativa
Lsat_1_v5_gn_2_104420 2.0kb upstream 2.0kb upstream 4393   true Lsat_1_v8_lg_2: 182880237-182884629 Lactuca sativa
Lsat_1_v5_gn_2_104420 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 182882630-182884629 Lactuca sativa
Lsat_1_v5_gn_2_104420 2.0kb downstream 2.0kb downstream 4393   true Lsat_1_v8_lg_2: 182878237-182882629 Lactuca sativa
Lsat_1_v5_gn_2_104420 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 182878237-182880236 Lactuca sativa
Lsat_1_v5_gn_2_104420 5.0kb upstream 5.0kb upstream 7393   true Lsat_1_v8_lg_2: 182880237-182887629 Lactuca sativa
Lsat_1_v5_gn_2_104420 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 182882630-182887629 Lactuca sativa
Lsat_1_v5_gn_2_104420 5.0kb downstream 5.0kb downstream 7393   true Lsat_1_v8_lg_2: 182875237-182882629 Lactuca sativa
Lsat_1_v5_gn_2_104420 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 182875237-182880236 Lactuca sativa
Lsat_1_v5_gn_2_104420 10.0kb upstream 10.0kb upstream 12393   true Lsat_1_v8_lg_2: 182880237-182892629 Lactuca sativa
Lsat_1_v5_gn_2_104420 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 182882630-182892629 Lactuca sativa
Lsat_1_v5_gn_2_104420 10.0kb downstream 10.0kb downstream 12393   true Lsat_1_v8_lg_2: 182870237-182882629 Lactuca sativa
Lsat_1_v5_gn_2_104420 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 182870237-182880236 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478648 5263 Asterids View MSA
123747323 5271 Pentapetalae View MSA
122786433 5272 Eudicot View MSA
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain