Gene : Lsat_1_v5_gn_2_104821 L. sativa V8
Defline:  (1 of 1) PTHR10263//PTHR10263:SF19//PTHR19241//PTHR19241:SF261 - V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT // SUBFAMILY NOT NAMED // ATP-BINDING CASSETTE TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  3010
Name:  ? Lsat_1_v5_gn_2_104821 Secondary Identifier:  ? PAC:38960917
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_104821 0.5kb upstream 0.5kb upstream 29572   true Lsat_1_v8_lg_2: 182429148-182458719 Lactuca sativa
Lsat_1_v5_gn_2_104821 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 182458220-182458719 Lactuca sativa
Lsat_1_v5_gn_2_104821 0.5kb downstream 0.5kb downstream 29572   true Lsat_1_v8_lg_2: 182428648-182458219 Lactuca sativa
Lsat_1_v5_gn_2_104821 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 182428648-182429147 Lactuca sativa
Lsat_1_v5_gn_2_104821 1.0kb upstream 1.0kb upstream 30072   true Lsat_1_v8_lg_2: 182429148-182459219 Lactuca sativa
Lsat_1_v5_gn_2_104821 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 182458220-182459219 Lactuca sativa
Lsat_1_v5_gn_2_104821 1.0kb downstream 1.0kb downstream 30072   true Lsat_1_v8_lg_2: 182428148-182458219 Lactuca sativa
Lsat_1_v5_gn_2_104821 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 182428148-182429147 Lactuca sativa
Lsat_1_v5_gn_2_104821 2.0kb upstream 2.0kb upstream 31072   true Lsat_1_v8_lg_2: 182429148-182460219 Lactuca sativa
Lsat_1_v5_gn_2_104821 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 182458220-182460219 Lactuca sativa
Lsat_1_v5_gn_2_104821 2.0kb downstream 2.0kb downstream 31072   true Lsat_1_v8_lg_2: 182427148-182458219 Lactuca sativa
Lsat_1_v5_gn_2_104821 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 182427148-182429147 Lactuca sativa
Lsat_1_v5_gn_2_104821 5.0kb upstream 5.0kb upstream 34072   true Lsat_1_v8_lg_2: 182429148-182463219 Lactuca sativa
Lsat_1_v5_gn_2_104821 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 182458220-182463219 Lactuca sativa
Lsat_1_v5_gn_2_104821 5.0kb downstream 5.0kb downstream 34072   true Lsat_1_v8_lg_2: 182424148-182458219 Lactuca sativa
Lsat_1_v5_gn_2_104821 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 182424148-182429147 Lactuca sativa
Lsat_1_v5_gn_2_104821 10.0kb upstream 10.0kb upstream 39072   true Lsat_1_v8_lg_2: 182429148-182468219 Lactuca sativa
Lsat_1_v5_gn_2_104821 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 182458220-182468219 Lactuca sativa
Lsat_1_v5_gn_2_104821 10.0kb downstream 10.0kb downstream 39072   true Lsat_1_v8_lg_2: 182419148-182458219 Lactuca sativa
Lsat_1_v5_gn_2_104821 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 182419148-182429147 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479080 5263 Asterids View MSA
123753017 5271 Pentapetalae View MSA
122797089 5272 Eudicot View MSA
122051259 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain