Gene : Lsat_1_v5_gn_2_106801 L. sativa V8
Defline:  (1 of 1) PTHR11406//PTHR11406:SF13 - PHOSPHOGLYCERATE KINASE // SUBFAMILY NOT NAMED Genomic Order:  3143
Name:  ? Lsat_1_v5_gn_2_106801 Secondary Identifier:  ? PAC:38962144
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ANAEROFRUCAT-PWY Lactuca sativa pathologic  
Lsativa ANAGLYCOLYSIS-PWY Lactuca sativa pathologic  
Lsativa CALVIN-PWY Lactuca sativa pathologic  
Lsativa GLUCONEO-PWY Lactuca sativa pathologic  
Lsativa PHOTOALL-PWY Lactuca sativa pathologic  
Lsativa PWY-1042 Lactuca sativa pathologic  
Lsativa PWY-5464 Lactuca sativa pathologic  
Lsativa SUCSYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_106801 0.5kb upstream 0.5kb upstream 4280   true Lsat_1_v8_lg_2: 186037682-186041961 Lactuca sativa
Lsat_1_v5_gn_2_106801 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 186037682-186038181 Lactuca sativa
Lsat_1_v5_gn_2_106801 0.5kb downstream 0.5kb downstream 4280   true Lsat_1_v8_lg_2: 186038182-186042461 Lactuca sativa
Lsat_1_v5_gn_2_106801 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 186041962-186042461 Lactuca sativa
Lsat_1_v5_gn_2_106801 1.0kb upstream 1.0kb upstream 4780   true Lsat_1_v8_lg_2: 186037182-186041961 Lactuca sativa
Lsat_1_v5_gn_2_106801 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 186037182-186038181 Lactuca sativa
Lsat_1_v5_gn_2_106801 1.0kb downstream 1.0kb downstream 4780   true Lsat_1_v8_lg_2: 186038182-186042961 Lactuca sativa
Lsat_1_v5_gn_2_106801 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 186041962-186042961 Lactuca sativa
Lsat_1_v5_gn_2_106801 2.0kb upstream 2.0kb upstream 5780   true Lsat_1_v8_lg_2: 186036182-186041961 Lactuca sativa
Lsat_1_v5_gn_2_106801 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 186036182-186038181 Lactuca sativa
Lsat_1_v5_gn_2_106801 2.0kb downstream 2.0kb downstream 5780   true Lsat_1_v8_lg_2: 186038182-186043961 Lactuca sativa
Lsat_1_v5_gn_2_106801 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 186041962-186043961 Lactuca sativa
Lsat_1_v5_gn_2_106801 5.0kb upstream 5.0kb upstream 8780   true Lsat_1_v8_lg_2: 186033182-186041961 Lactuca sativa
Lsat_1_v5_gn_2_106801 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 186033182-186038181 Lactuca sativa
Lsat_1_v5_gn_2_106801 5.0kb downstream 5.0kb downstream 8780   true Lsat_1_v8_lg_2: 186038182-186046961 Lactuca sativa
Lsat_1_v5_gn_2_106801 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 186041962-186046961 Lactuca sativa
Lsat_1_v5_gn_2_106801 10.0kb upstream 10.0kb upstream 13780   true Lsat_1_v8_lg_2: 186028182-186041961 Lactuca sativa
Lsat_1_v5_gn_2_106801 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 186028182-186038181 Lactuca sativa
Lsat_1_v5_gn_2_106801 10.0kb downstream 10.0kb downstream 13780   true Lsat_1_v8_lg_2: 186038182-186051961 Lactuca sativa
Lsat_1_v5_gn_2_106801 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 186041962-186051961 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468994 5263 Asterids View MSA
123742375 5271 Pentapetalae View MSA
122794772 5272 Eudicot View MSA
122048515 5273 Angiosperm View MSA
121310998 5274 Embryophyte View MSA
123425871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain