Gene : Lsat_1_v5_gn_2_105800 L. sativa V8
Defline:  (1 of 2) PF05479 - Photosystem I reaction centre subunit N (PSAN or PSI-N) (PsaN) Genomic Order:  3058
Name:  ? Lsat_1_v5_gn_2_105800 Secondary Identifier:  ? PAC:38960748
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_105800 0.5kb upstream 0.5kb upstream 1040   true Lsat_1_v8_lg_2: 183460717-183461756 Lactuca sativa
Lsat_1_v5_gn_2_105800 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 183460717-183461216 Lactuca sativa
Lsat_1_v5_gn_2_105800 0.5kb downstream 0.5kb downstream 1040   true Lsat_1_v8_lg_2: 183461217-183462256 Lactuca sativa
Lsat_1_v5_gn_2_105800 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 183461757-183462256 Lactuca sativa
Lsat_1_v5_gn_2_105800 1.0kb upstream 1.0kb upstream 1540   true Lsat_1_v8_lg_2: 183460217-183461756 Lactuca sativa
Lsat_1_v5_gn_2_105800 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 183460217-183461216 Lactuca sativa
Lsat_1_v5_gn_2_105800 1.0kb downstream 1.0kb downstream 1540   true Lsat_1_v8_lg_2: 183461217-183462756 Lactuca sativa
Lsat_1_v5_gn_2_105800 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 183461757-183462756 Lactuca sativa
Lsat_1_v5_gn_2_105800 2.0kb upstream 2.0kb upstream 2540   true Lsat_1_v8_lg_2: 183459217-183461756 Lactuca sativa
Lsat_1_v5_gn_2_105800 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 183459217-183461216 Lactuca sativa
Lsat_1_v5_gn_2_105800 2.0kb downstream 2.0kb downstream 2540   true Lsat_1_v8_lg_2: 183461217-183463756 Lactuca sativa
Lsat_1_v5_gn_2_105800 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 183461757-183463756 Lactuca sativa
Lsat_1_v5_gn_2_105800 5.0kb upstream 5.0kb upstream 5540   true Lsat_1_v8_lg_2: 183456217-183461756 Lactuca sativa
Lsat_1_v5_gn_2_105800 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 183456217-183461216 Lactuca sativa
Lsat_1_v5_gn_2_105800 5.0kb downstream 5.0kb downstream 5540   true Lsat_1_v8_lg_2: 183461217-183466756 Lactuca sativa
Lsat_1_v5_gn_2_105800 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 183461757-183466756 Lactuca sativa
Lsat_1_v5_gn_2_105800 10.0kb upstream 10.0kb upstream 10540   true Lsat_1_v8_lg_2: 183451217-183461756 Lactuca sativa
Lsat_1_v5_gn_2_105800 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 183451217-183461216 Lactuca sativa
Lsat_1_v5_gn_2_105800 10.0kb downstream 10.0kb downstream 10540   true Lsat_1_v8_lg_2: 183461217-183471756 Lactuca sativa
Lsat_1_v5_gn_2_105800 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 183461757-183471756 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467054 5263 Asterids View MSA
123736810 5271 Pentapetalae View MSA
122791162 5272 Eudicot View MSA
122050730 5273 Angiosperm View MSA
121348092 5274 Embryophyte View MSA
123425572 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain