Gene : Lsat_1_v5_gn_1_74220 L. sativa V8
Defline:  (1 of 1) PTHR12358//PTHR12358:SF39 - SPHINGOSINE KINASE // SUBFAMILY NOT NAMED Genomic Order:  2501
Name:  ? Lsat_1_v5_gn_1_74220 Secondary Identifier:  ? PAC:38948781
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5129 Lactuca sativa pathologic  
Lsativa PWY-6483 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_74220 0.5kb upstream 0.5kb upstream 4782   true Lsat_1_v8_lg_1: 90332339-90337120 Lactuca sativa
Lsat_1_v5_gn_1_74220 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 90332339-90332838 Lactuca sativa
Lsat_1_v5_gn_1_74220 0.5kb downstream 0.5kb downstream 4782   true Lsat_1_v8_lg_1: 90332839-90337620 Lactuca sativa
Lsat_1_v5_gn_1_74220 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 90337121-90337620 Lactuca sativa
Lsat_1_v5_gn_1_74220 1.0kb upstream 1.0kb upstream 5282   true Lsat_1_v8_lg_1: 90331839-90337120 Lactuca sativa
Lsat_1_v5_gn_1_74220 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 90331839-90332838 Lactuca sativa
Lsat_1_v5_gn_1_74220 1.0kb downstream 1.0kb downstream 5282   true Lsat_1_v8_lg_1: 90332839-90338120 Lactuca sativa
Lsat_1_v5_gn_1_74220 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 90337121-90338120 Lactuca sativa
Lsat_1_v5_gn_1_74220 2.0kb upstream 2.0kb upstream 6282   true Lsat_1_v8_lg_1: 90330839-90337120 Lactuca sativa
Lsat_1_v5_gn_1_74220 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 90330839-90332838 Lactuca sativa
Lsat_1_v5_gn_1_74220 2.0kb downstream 2.0kb downstream 6282   true Lsat_1_v8_lg_1: 90332839-90339120 Lactuca sativa
Lsat_1_v5_gn_1_74220 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 90337121-90339120 Lactuca sativa
Lsat_1_v5_gn_1_74220 5.0kb upstream 5.0kb upstream 9282   true Lsat_1_v8_lg_1: 90327839-90337120 Lactuca sativa
Lsat_1_v5_gn_1_74220 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 90327839-90332838 Lactuca sativa
Lsat_1_v5_gn_1_74220 5.0kb downstream 5.0kb downstream 9282   true Lsat_1_v8_lg_1: 90332839-90342120 Lactuca sativa
Lsat_1_v5_gn_1_74220 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 90337121-90342120 Lactuca sativa
Lsat_1_v5_gn_1_74220 10.0kb upstream 10.0kb upstream 14282   true Lsat_1_v8_lg_1: 90322839-90337120 Lactuca sativa
Lsat_1_v5_gn_1_74220 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 90322839-90332838 Lactuca sativa
Lsat_1_v5_gn_1_74220 10.0kb downstream 10.0kb downstream 14282   true Lsat_1_v8_lg_1: 90332839-90347120 Lactuca sativa
Lsat_1_v5_gn_1_74220 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 90337121-90347120 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475111 5263 Asterids View MSA
123752126 5271 Pentapetalae View MSA
122793643 5272 Eudicot View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain