Gene : Lsat_1_v5_gn_1_77001 L. sativa V8
Defline:  (1 of 1) PTHR22792//PTHR22792:SF52 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 6B Genomic Order:  2555
Name:  ? Lsat_1_v5_gn_1_77001 Secondary Identifier:  ? PAC:38945844
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_77001 0.5kb upstream 0.5kb upstream 3850   true Lsat_1_v8_lg_1: 93295290-93299139 Lactuca sativa
Lsat_1_v5_gn_1_77001 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 93298640-93299139 Lactuca sativa
Lsat_1_v5_gn_1_77001 0.5kb downstream 0.5kb downstream 3850   true Lsat_1_v8_lg_1: 93294790-93298639 Lactuca sativa
Lsat_1_v5_gn_1_77001 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 93294790-93295289 Lactuca sativa
Lsat_1_v5_gn_1_77001 1.0kb upstream 1.0kb upstream 4350   true Lsat_1_v8_lg_1: 93295290-93299639 Lactuca sativa
Lsat_1_v5_gn_1_77001 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 93298640-93299639 Lactuca sativa
Lsat_1_v5_gn_1_77001 1.0kb downstream 1.0kb downstream 4350   true Lsat_1_v8_lg_1: 93294290-93298639 Lactuca sativa
Lsat_1_v5_gn_1_77001 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 93294290-93295289 Lactuca sativa
Lsat_1_v5_gn_1_77001 2.0kb upstream 2.0kb upstream 5350   true Lsat_1_v8_lg_1: 93295290-93300639 Lactuca sativa
Lsat_1_v5_gn_1_77001 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 93298640-93300639 Lactuca sativa
Lsat_1_v5_gn_1_77001 2.0kb downstream 2.0kb downstream 5350   true Lsat_1_v8_lg_1: 93293290-93298639 Lactuca sativa
Lsat_1_v5_gn_1_77001 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 93293290-93295289 Lactuca sativa
Lsat_1_v5_gn_1_77001 5.0kb upstream 5.0kb upstream 8350   true Lsat_1_v8_lg_1: 93295290-93303639 Lactuca sativa
Lsat_1_v5_gn_1_77001 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 93298640-93303639 Lactuca sativa
Lsat_1_v5_gn_1_77001 5.0kb downstream 5.0kb downstream 8350   true Lsat_1_v8_lg_1: 93290290-93298639 Lactuca sativa
Lsat_1_v5_gn_1_77001 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 93290290-93295289 Lactuca sativa
Lsat_1_v5_gn_1_77001 10.0kb upstream 10.0kb upstream 13350   true Lsat_1_v8_lg_1: 93295290-93308639 Lactuca sativa
Lsat_1_v5_gn_1_77001 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 93298640-93308639 Lactuca sativa
Lsat_1_v5_gn_1_77001 10.0kb downstream 10.0kb downstream 13350   true Lsat_1_v8_lg_1: 93285290-93298639 Lactuca sativa
Lsat_1_v5_gn_1_77001 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 93285290-93295289 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478545 5263 Asterids View MSA
123744284 5271 Pentapetalae View MSA
122790327 5272 Eudicot View MSA
122051197 5273 Angiosperm View MSA
121349510 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain