Gene : Lsat_1_v5_gn_1_77081 L. sativa V8
Defline:  (1 of 1) PTHR22904//PTHR22904:SF379 - TPR REPEAT CONTAINING PROTEIN // RING ZINC FINGER-CONTAINING PROTEIN Genomic Order:  2558
Name:  ? Lsat_1_v5_gn_1_77081 Secondary Identifier:  ? PAC:38946430
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_77081 0.5kb upstream 0.5kb upstream 4032   true Lsat_1_v8_lg_1: 93322416-93326447 Lactuca sativa
Lsat_1_v5_gn_1_77081 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 93325948-93326447 Lactuca sativa
Lsat_1_v5_gn_1_77081 0.5kb downstream 0.5kb downstream 4032   true Lsat_1_v8_lg_1: 93321916-93325947 Lactuca sativa
Lsat_1_v5_gn_1_77081 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 93321916-93322415 Lactuca sativa
Lsat_1_v5_gn_1_77081 1.0kb upstream 1.0kb upstream 4532   true Lsat_1_v8_lg_1: 93322416-93326947 Lactuca sativa
Lsat_1_v5_gn_1_77081 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 93325948-93326947 Lactuca sativa
Lsat_1_v5_gn_1_77081 1.0kb downstream 1.0kb downstream 4532   true Lsat_1_v8_lg_1: 93321416-93325947 Lactuca sativa
Lsat_1_v5_gn_1_77081 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 93321416-93322415 Lactuca sativa
Lsat_1_v5_gn_1_77081 2.0kb upstream 2.0kb upstream 5532   true Lsat_1_v8_lg_1: 93322416-93327947 Lactuca sativa
Lsat_1_v5_gn_1_77081 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 93325948-93327947 Lactuca sativa
Lsat_1_v5_gn_1_77081 2.0kb downstream 2.0kb downstream 5532   true Lsat_1_v8_lg_1: 93320416-93325947 Lactuca sativa
Lsat_1_v5_gn_1_77081 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 93320416-93322415 Lactuca sativa
Lsat_1_v5_gn_1_77081 5.0kb upstream 5.0kb upstream 8532   true Lsat_1_v8_lg_1: 93322416-93330947 Lactuca sativa
Lsat_1_v5_gn_1_77081 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 93325948-93330947 Lactuca sativa
Lsat_1_v5_gn_1_77081 5.0kb downstream 5.0kb downstream 8532   true Lsat_1_v8_lg_1: 93317416-93325947 Lactuca sativa
Lsat_1_v5_gn_1_77081 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 93317416-93322415 Lactuca sativa
Lsat_1_v5_gn_1_77081 10.0kb upstream 10.0kb upstream 13532   true Lsat_1_v8_lg_1: 93322416-93335947 Lactuca sativa
Lsat_1_v5_gn_1_77081 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 93325948-93335947 Lactuca sativa
Lsat_1_v5_gn_1_77081 10.0kb downstream 10.0kb downstream 13532   true Lsat_1_v8_lg_1: 93312416-93325947 Lactuca sativa
Lsat_1_v5_gn_1_77081 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 93312416-93322415 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041067 5273 Angiosperm View MSA
121467306 5263 Asterids View MSA
123736944 5271 Pentapetalae View MSA
122792971 5272 Eudicot View MSA
121347266 5274 Embryophyte View MSA
123380522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain