Gene : Lsat_1_v5_gn_1_78000 L. sativa V8
Defline:  (1 of 1) 1.8.3.5//1.8.3.6 - Prenylcysteine oxidase / Prenylcysteine lyase // Farnesylcysteine lyase / FC lyase Genomic Order:  2602
Name:  ? Lsat_1_v5_gn_1_78000 Secondary Identifier:  ? PAC:38947947
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6577 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_78000 0.5kb upstream 0.5kb upstream 3917   true Lsat_1_v8_lg_1: 95269832-95273748 Lactuca sativa
Lsat_1_v5_gn_1_78000 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 95269832-95270331 Lactuca sativa
Lsat_1_v5_gn_1_78000 0.5kb downstream 0.5kb downstream 3917   true Lsat_1_v8_lg_1: 95270332-95274248 Lactuca sativa
Lsat_1_v5_gn_1_78000 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 95273749-95274248 Lactuca sativa
Lsat_1_v5_gn_1_78000 1.0kb upstream 1.0kb upstream 4417   true Lsat_1_v8_lg_1: 95269332-95273748 Lactuca sativa
Lsat_1_v5_gn_1_78000 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 95269332-95270331 Lactuca sativa
Lsat_1_v5_gn_1_78000 1.0kb downstream 1.0kb downstream 4417   true Lsat_1_v8_lg_1: 95270332-95274748 Lactuca sativa
Lsat_1_v5_gn_1_78000 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 95273749-95274748 Lactuca sativa
Lsat_1_v5_gn_1_78000 2.0kb upstream 2.0kb upstream 5417   true Lsat_1_v8_lg_1: 95268332-95273748 Lactuca sativa
Lsat_1_v5_gn_1_78000 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 95268332-95270331 Lactuca sativa
Lsat_1_v5_gn_1_78000 2.0kb downstream 2.0kb downstream 5417   true Lsat_1_v8_lg_1: 95270332-95275748 Lactuca sativa
Lsat_1_v5_gn_1_78000 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 95273749-95275748 Lactuca sativa
Lsat_1_v5_gn_1_78000 5.0kb upstream 5.0kb upstream 8417   true Lsat_1_v8_lg_1: 95265332-95273748 Lactuca sativa
Lsat_1_v5_gn_1_78000 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 95265332-95270331 Lactuca sativa
Lsat_1_v5_gn_1_78000 5.0kb downstream 5.0kb downstream 8417   true Lsat_1_v8_lg_1: 95270332-95278748 Lactuca sativa
Lsat_1_v5_gn_1_78000 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 95273749-95278748 Lactuca sativa
Lsat_1_v5_gn_1_78000 10.0kb upstream 10.0kb upstream 13417   true Lsat_1_v8_lg_1: 95260332-95273748 Lactuca sativa
Lsat_1_v5_gn_1_78000 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 95260332-95270331 Lactuca sativa
Lsat_1_v5_gn_1_78000 10.0kb downstream 10.0kb downstream 13417   true Lsat_1_v8_lg_1: 95270332-95283748 Lactuca sativa
Lsat_1_v5_gn_1_78000 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 95273749-95283748 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471596 5263 Asterids View MSA
123739129 5271 Pentapetalae View MSA
122769945 5272 Eudicot View MSA
122041825 5273 Angiosperm View MSA
121345050 5274 Embryophyte View MSA
123425612 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain