Gene : Lsat_1_v5_gn_1_78600 L. sativa V8
Defline:  (1 of 1) PTHR24349//PTHR24349:SF166 - SERINE/THREONINE-PROTEIN KINASE // CALCIUM-DEPENDENT PROTEIN KINASE 11-RELATED Genomic Order:  2593
Name:  ? Lsat_1_v5_gn_1_78600 Secondary Identifier:  ? PAC:38944606
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_78600 0.5kb upstream 0.5kb upstream 3826   true Lsat_1_v8_lg_1: 94536372-94540197 Lactuca sativa
Lsat_1_v5_gn_1_78600 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 94539698-94540197 Lactuca sativa
Lsat_1_v5_gn_1_78600 0.5kb downstream 0.5kb downstream 3826   true Lsat_1_v8_lg_1: 94535872-94539697 Lactuca sativa
Lsat_1_v5_gn_1_78600 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 94535872-94536371 Lactuca sativa
Lsat_1_v5_gn_1_78600 1.0kb upstream 1.0kb upstream 4326   true Lsat_1_v8_lg_1: 94536372-94540697 Lactuca sativa
Lsat_1_v5_gn_1_78600 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 94539698-94540697 Lactuca sativa
Lsat_1_v5_gn_1_78600 1.0kb downstream 1.0kb downstream 4326   true Lsat_1_v8_lg_1: 94535372-94539697 Lactuca sativa
Lsat_1_v5_gn_1_78600 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 94535372-94536371 Lactuca sativa
Lsat_1_v5_gn_1_78600 2.0kb upstream 2.0kb upstream 5326   true Lsat_1_v8_lg_1: 94536372-94541697 Lactuca sativa
Lsat_1_v5_gn_1_78600 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 94539698-94541697 Lactuca sativa
Lsat_1_v5_gn_1_78600 2.0kb downstream 2.0kb downstream 5326   true Lsat_1_v8_lg_1: 94534372-94539697 Lactuca sativa
Lsat_1_v5_gn_1_78600 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 94534372-94536371 Lactuca sativa
Lsat_1_v5_gn_1_78600 5.0kb upstream 5.0kb upstream 8326   true Lsat_1_v8_lg_1: 94536372-94544697 Lactuca sativa
Lsat_1_v5_gn_1_78600 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 94539698-94544697 Lactuca sativa
Lsat_1_v5_gn_1_78600 5.0kb downstream 5.0kb downstream 8326   true Lsat_1_v8_lg_1: 94531372-94539697 Lactuca sativa
Lsat_1_v5_gn_1_78600 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 94531372-94536371 Lactuca sativa
Lsat_1_v5_gn_1_78600 10.0kb upstream 10.0kb upstream 13326   true Lsat_1_v8_lg_1: 94536372-94549697 Lactuca sativa
Lsat_1_v5_gn_1_78600 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 94539698-94549697 Lactuca sativa
Lsat_1_v5_gn_1_78600 10.0kb downstream 10.0kb downstream 13326   true Lsat_1_v8_lg_1: 94526372-94539697 Lactuca sativa
Lsat_1_v5_gn_1_78600 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 94526372-94536371 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471112 5263 Asterids View MSA
123741053 5271 Pentapetalae View MSA
122787584 5272 Eudicot View MSA
122047311 5273 Angiosperm View MSA
121310726 5274 Embryophyte View MSA
123427978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain