Gene : Lsat_1_v5_gn_1_8361 L. sativa V8
Defline:  (1 of 1) 1.14.13.122 - Chlorophyllide-a oxygenase / Cholorophyll-b synthase Genomic Order:  257
Name:  ? Lsat_1_v5_gn_1_8361 Secondary Identifier:  ? PAC:38947356
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5068 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_8361 0.5kb upstream 0.5kb upstream 3970   true Lsat_1_v8_lg_1: 10103887-10107856 Lactuca sativa
Lsat_1_v5_gn_1_8361 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 10103887-10104386 Lactuca sativa
Lsat_1_v5_gn_1_8361 0.5kb downstream 0.5kb downstream 3970   true Lsat_1_v8_lg_1: 10104387-10108356 Lactuca sativa
Lsat_1_v5_gn_1_8361 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 10107857-10108356 Lactuca sativa
Lsat_1_v5_gn_1_8361 1.0kb upstream 1.0kb upstream 4470   true Lsat_1_v8_lg_1: 10103387-10107856 Lactuca sativa
Lsat_1_v5_gn_1_8361 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 10103387-10104386 Lactuca sativa
Lsat_1_v5_gn_1_8361 1.0kb downstream 1.0kb downstream 4470   true Lsat_1_v8_lg_1: 10104387-10108856 Lactuca sativa
Lsat_1_v5_gn_1_8361 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 10107857-10108856 Lactuca sativa
Lsat_1_v5_gn_1_8361 2.0kb upstream 2.0kb upstream 5470   true Lsat_1_v8_lg_1: 10102387-10107856 Lactuca sativa
Lsat_1_v5_gn_1_8361 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 10102387-10104386 Lactuca sativa
Lsat_1_v5_gn_1_8361 2.0kb downstream 2.0kb downstream 5470   true Lsat_1_v8_lg_1: 10104387-10109856 Lactuca sativa
Lsat_1_v5_gn_1_8361 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 10107857-10109856 Lactuca sativa
Lsat_1_v5_gn_1_8361 5.0kb upstream 5.0kb upstream 8470   true Lsat_1_v8_lg_1: 10099387-10107856 Lactuca sativa
Lsat_1_v5_gn_1_8361 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 10099387-10104386 Lactuca sativa
Lsat_1_v5_gn_1_8361 5.0kb downstream 5.0kb downstream 8470   true Lsat_1_v8_lg_1: 10104387-10112856 Lactuca sativa
Lsat_1_v5_gn_1_8361 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 10107857-10112856 Lactuca sativa
Lsat_1_v5_gn_1_8361 10.0kb upstream 10.0kb upstream 13470   true Lsat_1_v8_lg_1: 10094387-10107856 Lactuca sativa
Lsat_1_v5_gn_1_8361 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 10094387-10104386 Lactuca sativa
Lsat_1_v5_gn_1_8361 10.0kb downstream 10.0kb downstream 13470   true Lsat_1_v8_lg_1: 10104387-10117856 Lactuca sativa
Lsat_1_v5_gn_1_8361 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 10107857-10117856 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471834 5263 Asterids View MSA
123744269 5271 Pentapetalae View MSA
122787506 5272 Eudicot View MSA
122048070 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121348979 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain