Gene : Lsat_1_v5_gn_1_82301 L. sativa V8
Defline:  (1 of 455) PF01535 - PPR repeat (PPR) Genomic Order:  2710
Name:  ? Lsat_1_v5_gn_1_82301 Secondary Identifier:  ? PAC:38943410
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_82301 0.5kb upstream 0.5kb upstream 2691   true Lsat_1_v8_lg_1: 102238515-102241205 Lactuca sativa
Lsat_1_v5_gn_1_82301 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 102238515-102239014 Lactuca sativa
Lsat_1_v5_gn_1_82301 0.5kb downstream 0.5kb downstream 2691   true Lsat_1_v8_lg_1: 102239015-102241705 Lactuca sativa
Lsat_1_v5_gn_1_82301 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 102241206-102241705 Lactuca sativa
Lsat_1_v5_gn_1_82301 1.0kb upstream 1.0kb upstream 3191   true Lsat_1_v8_lg_1: 102238015-102241205 Lactuca sativa
Lsat_1_v5_gn_1_82301 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 102238015-102239014 Lactuca sativa
Lsat_1_v5_gn_1_82301 1.0kb downstream 1.0kb downstream 3191   true Lsat_1_v8_lg_1: 102239015-102242205 Lactuca sativa
Lsat_1_v5_gn_1_82301 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 102241206-102242205 Lactuca sativa
Lsat_1_v5_gn_1_82301 2.0kb upstream 2.0kb upstream 4191   true Lsat_1_v8_lg_1: 102237015-102241205 Lactuca sativa
Lsat_1_v5_gn_1_82301 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 102237015-102239014 Lactuca sativa
Lsat_1_v5_gn_1_82301 2.0kb downstream 2.0kb downstream 4191   true Lsat_1_v8_lg_1: 102239015-102243205 Lactuca sativa
Lsat_1_v5_gn_1_82301 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 102241206-102243205 Lactuca sativa
Lsat_1_v5_gn_1_82301 5.0kb upstream 5.0kb upstream 7191   true Lsat_1_v8_lg_1: 102234015-102241205 Lactuca sativa
Lsat_1_v5_gn_1_82301 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 102234015-102239014 Lactuca sativa
Lsat_1_v5_gn_1_82301 5.0kb downstream 5.0kb downstream 7191   true Lsat_1_v8_lg_1: 102239015-102246205 Lactuca sativa
Lsat_1_v5_gn_1_82301 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 102241206-102246205 Lactuca sativa
Lsat_1_v5_gn_1_82301 10.0kb upstream 10.0kb upstream 12191   true Lsat_1_v8_lg_1: 102229015-102241205 Lactuca sativa
Lsat_1_v5_gn_1_82301 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 102229015-102239014 Lactuca sativa
Lsat_1_v5_gn_1_82301 10.0kb downstream 10.0kb downstream 12191   true Lsat_1_v8_lg_1: 102239015-102251205 Lactuca sativa
Lsat_1_v5_gn_1_82301 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 102241206-102251205 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476012 5263 Asterids View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain