Gene : Lsat_1_v5_gn_1_87140 L. sativa V8
Defline:  (1 of 2) PTHR11527//PTHR11527:SF151 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // SUBFAMILY NOT NAMED Genomic Order:  2820
Name:  ? Lsat_1_v5_gn_1_87140 Secondary Identifier:  ? PAC:38948517
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_87140 0.5kb upstream 0.5kb upstream 1949   true Lsat_1_v8_lg_1: 110034567-110036515 Lactuca sativa
Lsat_1_v5_gn_1_87140 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 110036016-110036515 Lactuca sativa
Lsat_1_v5_gn_1_87140 0.5kb downstream 0.5kb downstream 1949   true Lsat_1_v8_lg_1: 110034067-110036015 Lactuca sativa
Lsat_1_v5_gn_1_87140 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 110034067-110034566 Lactuca sativa
Lsat_1_v5_gn_1_87140 1.0kb upstream 1.0kb upstream 2449   true Lsat_1_v8_lg_1: 110034567-110037015 Lactuca sativa
Lsat_1_v5_gn_1_87140 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 110036016-110037015 Lactuca sativa
Lsat_1_v5_gn_1_87140 1.0kb downstream 1.0kb downstream 2449   true Lsat_1_v8_lg_1: 110033567-110036015 Lactuca sativa
Lsat_1_v5_gn_1_87140 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 110033567-110034566 Lactuca sativa
Lsat_1_v5_gn_1_87140 2.0kb upstream 2.0kb upstream 3449   true Lsat_1_v8_lg_1: 110034567-110038015 Lactuca sativa
Lsat_1_v5_gn_1_87140 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 110036016-110038015 Lactuca sativa
Lsat_1_v5_gn_1_87140 2.0kb downstream 2.0kb downstream 3449   true Lsat_1_v8_lg_1: 110032567-110036015 Lactuca sativa
Lsat_1_v5_gn_1_87140 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 110032567-110034566 Lactuca sativa
Lsat_1_v5_gn_1_87140 5.0kb upstream 5.0kb upstream 6449   true Lsat_1_v8_lg_1: 110034567-110041015 Lactuca sativa
Lsat_1_v5_gn_1_87140 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 110036016-110041015 Lactuca sativa
Lsat_1_v5_gn_1_87140 5.0kb downstream 5.0kb downstream 6449   true Lsat_1_v8_lg_1: 110029567-110036015 Lactuca sativa
Lsat_1_v5_gn_1_87140 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 110029567-110034566 Lactuca sativa
Lsat_1_v5_gn_1_87140 10.0kb upstream 10.0kb upstream 11449   true Lsat_1_v8_lg_1: 110034567-110046015 Lactuca sativa
Lsat_1_v5_gn_1_87140 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 110036016-110046015 Lactuca sativa
Lsat_1_v5_gn_1_87140 10.0kb downstream 10.0kb downstream 11449   true Lsat_1_v8_lg_1: 110024567-110036015 Lactuca sativa
Lsat_1_v5_gn_1_87140 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 110024567-110034566 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478951 5263 Asterids View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain