Gene : Lsat_1_v5_gn_1_89600 L. sativa V8
Defline:  (1 of 1) KOG1911 - Heterochromatin-associated protein HP1 and related CHROMO domain proteins Genomic Order:  2840
Name:  ? Lsat_1_v5_gn_1_89600 Secondary Identifier:  ? PAC:38944852
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_89600 0.5kb upstream 0.5kb upstream 4266   true Lsat_1_v8_lg_1: 111348986-111353251 Lactuca sativa
Lsat_1_v5_gn_1_89600 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 111352752-111353251 Lactuca sativa
Lsat_1_v5_gn_1_89600 0.5kb downstream 0.5kb downstream 4266   true Lsat_1_v8_lg_1: 111348486-111352751 Lactuca sativa
Lsat_1_v5_gn_1_89600 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 111348486-111348985 Lactuca sativa
Lsat_1_v5_gn_1_89600 1.0kb upstream 1.0kb upstream 4766   true Lsat_1_v8_lg_1: 111348986-111353751 Lactuca sativa
Lsat_1_v5_gn_1_89600 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 111352752-111353751 Lactuca sativa
Lsat_1_v5_gn_1_89600 1.0kb downstream 1.0kb downstream 4766   true Lsat_1_v8_lg_1: 111347986-111352751 Lactuca sativa
Lsat_1_v5_gn_1_89600 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 111347986-111348985 Lactuca sativa
Lsat_1_v5_gn_1_89600 2.0kb upstream 2.0kb upstream 5766   true Lsat_1_v8_lg_1: 111348986-111354751 Lactuca sativa
Lsat_1_v5_gn_1_89600 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 111352752-111354751 Lactuca sativa
Lsat_1_v5_gn_1_89600 2.0kb downstream 2.0kb downstream 5766   true Lsat_1_v8_lg_1: 111346986-111352751 Lactuca sativa
Lsat_1_v5_gn_1_89600 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 111346986-111348985 Lactuca sativa
Lsat_1_v5_gn_1_89600 5.0kb upstream 5.0kb upstream 8766   true Lsat_1_v8_lg_1: 111348986-111357751 Lactuca sativa
Lsat_1_v5_gn_1_89600 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 111352752-111357751 Lactuca sativa
Lsat_1_v5_gn_1_89600 5.0kb downstream 5.0kb downstream 8766   true Lsat_1_v8_lg_1: 111343986-111352751 Lactuca sativa
Lsat_1_v5_gn_1_89600 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 111343986-111348985 Lactuca sativa
Lsat_1_v5_gn_1_89600 10.0kb upstream 10.0kb upstream 13766   true Lsat_1_v8_lg_1: 111348986-111362751 Lactuca sativa
Lsat_1_v5_gn_1_89600 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 111352752-111362751 Lactuca sativa
Lsat_1_v5_gn_1_89600 10.0kb downstream 10.0kb downstream 13766   true Lsat_1_v8_lg_1: 111338986-111352751 Lactuca sativa
Lsat_1_v5_gn_1_89600 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 111338986-111348985 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470411 5263 Asterids View MSA
123743602 5271 Pentapetalae View MSA
122791541 5272 Eudicot View MSA
122044379 5273 Angiosperm View MSA
121347782 5274 Embryophyte View MSA
123380626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain