Gene : Lsat_1_v5_gn_2_128220 L. sativa V8
Defline:  (1 of 34) 1.10.3.9 - Photosystem II Genomic Order:  3810
Name:  ? Lsat_1_v5_gn_2_128220 Secondary Identifier:  ? PAC:38961039
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PHOTOALL-PWY Lactuca sativa pathologic  
Lsativa PWY-101 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_128220 0.5kb upstream 0.5kb upstream 1265   true Lsat_1_v8_lg_2: 207448952-207450216 Lactuca sativa
Lsat_1_v5_gn_2_128220 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 207448952-207449451 Lactuca sativa
Lsat_1_v5_gn_2_128220 0.5kb downstream 0.5kb downstream 1265   true Lsat_1_v8_lg_2: 207449452-207450716 Lactuca sativa
Lsat_1_v5_gn_2_128220 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 207450217-207450716 Lactuca sativa
Lsat_1_v5_gn_2_128220 1.0kb upstream 1.0kb upstream 1765   true Lsat_1_v8_lg_2: 207448452-207450216 Lactuca sativa
Lsat_1_v5_gn_2_128220 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 207448452-207449451 Lactuca sativa
Lsat_1_v5_gn_2_128220 1.0kb downstream 1.0kb downstream 1765   true Lsat_1_v8_lg_2: 207449452-207451216 Lactuca sativa
Lsat_1_v5_gn_2_128220 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 207450217-207451216 Lactuca sativa
Lsat_1_v5_gn_2_128220 2.0kb upstream 2.0kb upstream 2765   true Lsat_1_v8_lg_2: 207447452-207450216 Lactuca sativa
Lsat_1_v5_gn_2_128220 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 207447452-207449451 Lactuca sativa
Lsat_1_v5_gn_2_128220 2.0kb downstream 2.0kb downstream 2765   true Lsat_1_v8_lg_2: 207449452-207452216 Lactuca sativa
Lsat_1_v5_gn_2_128220 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 207450217-207452216 Lactuca sativa
Lsat_1_v5_gn_2_128220 5.0kb upstream 5.0kb upstream 5765   true Lsat_1_v8_lg_2: 207444452-207450216 Lactuca sativa
Lsat_1_v5_gn_2_128220 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 207444452-207449451 Lactuca sativa
Lsat_1_v5_gn_2_128220 5.0kb downstream 5.0kb downstream 5765   true Lsat_1_v8_lg_2: 207449452-207455216 Lactuca sativa
Lsat_1_v5_gn_2_128220 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 207450217-207455216 Lactuca sativa
Lsat_1_v5_gn_2_128220 10.0kb upstream 10.0kb upstream 10765   true Lsat_1_v8_lg_2: 207439452-207450216 Lactuca sativa
Lsat_1_v5_gn_2_128220 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 207439452-207449451 Lactuca sativa
Lsat_1_v5_gn_2_128220 10.0kb downstream 10.0kb downstream 10765   true Lsat_1_v8_lg_2: 207449452-207460216 Lactuca sativa
Lsat_1_v5_gn_2_128220 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 207450217-207460216 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477696 5263 Asterids View MSA
123753260 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain