Gene : Lsat_1_v5_gn_2_127741 L. sativa V8
Defline:  (1 of 1) 2.7.1.138 - Ceramide kinase / Acylsphingosine kinase Genomic Order:  3806
Name:  ? Lsat_1_v5_gn_2_127741 Secondary Identifier:  ? PAC:38961045
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5129 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_127741 0.5kb upstream 0.5kb upstream 6281   true Lsat_1_v8_lg_2: 207393013-207399293 Lactuca sativa
Lsat_1_v5_gn_2_127741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 207398794-207399293 Lactuca sativa
Lsat_1_v5_gn_2_127741 0.5kb downstream 0.5kb downstream 6281   true Lsat_1_v8_lg_2: 207392513-207398793 Lactuca sativa
Lsat_1_v5_gn_2_127741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 207392513-207393012 Lactuca sativa
Lsat_1_v5_gn_2_127741 1.0kb upstream 1.0kb upstream 6781   true Lsat_1_v8_lg_2: 207393013-207399793 Lactuca sativa
Lsat_1_v5_gn_2_127741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 207398794-207399793 Lactuca sativa
Lsat_1_v5_gn_2_127741 1.0kb downstream 1.0kb downstream 6781   true Lsat_1_v8_lg_2: 207392013-207398793 Lactuca sativa
Lsat_1_v5_gn_2_127741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 207392013-207393012 Lactuca sativa
Lsat_1_v5_gn_2_127741 2.0kb upstream 2.0kb upstream 7781   true Lsat_1_v8_lg_2: 207393013-207400793 Lactuca sativa
Lsat_1_v5_gn_2_127741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 207398794-207400793 Lactuca sativa
Lsat_1_v5_gn_2_127741 2.0kb downstream 2.0kb downstream 7781   true Lsat_1_v8_lg_2: 207391013-207398793 Lactuca sativa
Lsat_1_v5_gn_2_127741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 207391013-207393012 Lactuca sativa
Lsat_1_v5_gn_2_127741 5.0kb upstream 5.0kb upstream 10781   true Lsat_1_v8_lg_2: 207393013-207403793 Lactuca sativa
Lsat_1_v5_gn_2_127741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 207398794-207403793 Lactuca sativa
Lsat_1_v5_gn_2_127741 5.0kb downstream 5.0kb downstream 10781   true Lsat_1_v8_lg_2: 207388013-207398793 Lactuca sativa
Lsat_1_v5_gn_2_127741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 207388013-207393012 Lactuca sativa
Lsat_1_v5_gn_2_127741 10.0kb upstream 10.0kb upstream 15781   true Lsat_1_v8_lg_2: 207393013-207408793 Lactuca sativa
Lsat_1_v5_gn_2_127741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 207398794-207408793 Lactuca sativa
Lsat_1_v5_gn_2_127741 10.0kb downstream 10.0kb downstream 15781   true Lsat_1_v8_lg_2: 207383013-207398793 Lactuca sativa
Lsat_1_v5_gn_2_127741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 207383013-207393012 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467490 5263 Asterids View MSA
123746434 5271 Pentapetalae View MSA
122791324 5272 Eudicot View MSA
122045057 5273 Angiosperm View MSA
121345163 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain