Gene : Lsat_1_v5_gn_2_130181 L. sativa V8
Defline:  (1 of 2) PTHR21726:SF51 - GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MTG10 Genomic Order:  3882
Name:  ? Lsat_1_v5_gn_2_130181 Secondary Identifier:  ? PAC:38961827
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_130181 0.5kb upstream 0.5kb upstream 3568   true Lsat_1_v8_lg_2: 209825895-209829462 Lactuca sativa
Lsat_1_v5_gn_2_130181 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 209828963-209829462 Lactuca sativa
Lsat_1_v5_gn_2_130181 0.5kb downstream 0.5kb downstream 3568   true Lsat_1_v8_lg_2: 209825395-209828962 Lactuca sativa
Lsat_1_v5_gn_2_130181 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 209825395-209825894 Lactuca sativa
Lsat_1_v5_gn_2_130181 1.0kb upstream 1.0kb upstream 4068   true Lsat_1_v8_lg_2: 209825895-209829962 Lactuca sativa
Lsat_1_v5_gn_2_130181 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 209828963-209829962 Lactuca sativa
Lsat_1_v5_gn_2_130181 1.0kb downstream 1.0kb downstream 4068   true Lsat_1_v8_lg_2: 209824895-209828962 Lactuca sativa
Lsat_1_v5_gn_2_130181 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 209824895-209825894 Lactuca sativa
Lsat_1_v5_gn_2_130181 2.0kb upstream 2.0kb upstream 5068   true Lsat_1_v8_lg_2: 209825895-209830962 Lactuca sativa
Lsat_1_v5_gn_2_130181 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 209828963-209830962 Lactuca sativa
Lsat_1_v5_gn_2_130181 2.0kb downstream 2.0kb downstream 5068   true Lsat_1_v8_lg_2: 209823895-209828962 Lactuca sativa
Lsat_1_v5_gn_2_130181 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 209823895-209825894 Lactuca sativa
Lsat_1_v5_gn_2_130181 5.0kb upstream 5.0kb upstream 8068   true Lsat_1_v8_lg_2: 209825895-209833962 Lactuca sativa
Lsat_1_v5_gn_2_130181 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 209828963-209833962 Lactuca sativa
Lsat_1_v5_gn_2_130181 5.0kb downstream 5.0kb downstream 8068   true Lsat_1_v8_lg_2: 209820895-209828962 Lactuca sativa
Lsat_1_v5_gn_2_130181 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 209820895-209825894 Lactuca sativa
Lsat_1_v5_gn_2_130181 10.0kb upstream 10.0kb upstream 13068   true Lsat_1_v8_lg_2: 209825895-209838962 Lactuca sativa
Lsat_1_v5_gn_2_130181 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 209828963-209838962 Lactuca sativa
Lsat_1_v5_gn_2_130181 10.0kb downstream 10.0kb downstream 13068   true Lsat_1_v8_lg_2: 209815895-209828962 Lactuca sativa
Lsat_1_v5_gn_2_130181 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 209815895-209825894 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466820 5263 Asterids View MSA
123749389 5271 Pentapetalae View MSA
122793525 5272 Eudicot View MSA
122045763 5273 Angiosperm View MSA
121310498 5274 Embryophyte View MSA
123347966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain