Gene : Lsat_1_v5_gn_2_132020 L. sativa V8
Defline:  (1 of 1) PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  3975
Name:  ? Lsat_1_v5_gn_2_132020 Secondary Identifier:  ? PAC:38961688
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_132020 0.5kb upstream 0.5kb upstream 2772   true Lsat_1_v8_lg_2: 212504212-212506983 Lactuca sativa
Lsat_1_v5_gn_2_132020 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 212506484-212506983 Lactuca sativa
Lsat_1_v5_gn_2_132020 0.5kb downstream 0.5kb downstream 2772   true Lsat_1_v8_lg_2: 212503712-212506483 Lactuca sativa
Lsat_1_v5_gn_2_132020 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 212503712-212504211 Lactuca sativa
Lsat_1_v5_gn_2_132020 1.0kb upstream 1.0kb upstream 3272   true Lsat_1_v8_lg_2: 212504212-212507483 Lactuca sativa
Lsat_1_v5_gn_2_132020 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 212506484-212507483 Lactuca sativa
Lsat_1_v5_gn_2_132020 1.0kb downstream 1.0kb downstream 3272   true Lsat_1_v8_lg_2: 212503212-212506483 Lactuca sativa
Lsat_1_v5_gn_2_132020 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 212503212-212504211 Lactuca sativa
Lsat_1_v5_gn_2_132020 2.0kb upstream 2.0kb upstream 4272   true Lsat_1_v8_lg_2: 212504212-212508483 Lactuca sativa
Lsat_1_v5_gn_2_132020 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 212506484-212508483 Lactuca sativa
Lsat_1_v5_gn_2_132020 2.0kb downstream 2.0kb downstream 4272   true Lsat_1_v8_lg_2: 212502212-212506483 Lactuca sativa
Lsat_1_v5_gn_2_132020 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 212502212-212504211 Lactuca sativa
Lsat_1_v5_gn_2_132020 5.0kb upstream 5.0kb upstream 7272   true Lsat_1_v8_lg_2: 212504212-212511483 Lactuca sativa
Lsat_1_v5_gn_2_132020 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 212506484-212511483 Lactuca sativa
Lsat_1_v5_gn_2_132020 5.0kb downstream 5.0kb downstream 7272   true Lsat_1_v8_lg_2: 212499212-212506483 Lactuca sativa
Lsat_1_v5_gn_2_132020 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 212499212-212504211 Lactuca sativa
Lsat_1_v5_gn_2_132020 10.0kb upstream 10.0kb upstream 12272   true Lsat_1_v8_lg_2: 212504212-212516483 Lactuca sativa
Lsat_1_v5_gn_2_132020 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 212506484-212516483 Lactuca sativa
Lsat_1_v5_gn_2_132020 10.0kb downstream 10.0kb downstream 12272   true Lsat_1_v8_lg_2: 212494212-212506483 Lactuca sativa
Lsat_1_v5_gn_2_132020 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 212494212-212504211 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478078 5263 Asterids View MSA
123745202 5271 Pentapetalae View MSA
122785813 5272 Eudicot View MSA
122050504 5273 Angiosperm View MSA
121311951 5274 Embryophyte View MSA
123349176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain