Gene : Lsat_1_v5_gn_2_133601 L. sativa V8
Defline:  (1 of 2) PTHR10794:SF58 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  4006
Name:  ? Lsat_1_v5_gn_2_133601 Secondary Identifier:  ? PAC:38963136
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_133601 0.5kb upstream 0.5kb upstream 3369   true Lsat_1_v8_lg_2: 213329187-213332555 Lactuca sativa
Lsat_1_v5_gn_2_133601 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 213332056-213332555 Lactuca sativa
Lsat_1_v5_gn_2_133601 0.5kb downstream 0.5kb downstream 3369   true Lsat_1_v8_lg_2: 213328687-213332055 Lactuca sativa
Lsat_1_v5_gn_2_133601 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 213328687-213329186 Lactuca sativa
Lsat_1_v5_gn_2_133601 1.0kb upstream 1.0kb upstream 3869   true Lsat_1_v8_lg_2: 213329187-213333055 Lactuca sativa
Lsat_1_v5_gn_2_133601 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 213332056-213333055 Lactuca sativa
Lsat_1_v5_gn_2_133601 1.0kb downstream 1.0kb downstream 3869   true Lsat_1_v8_lg_2: 213328187-213332055 Lactuca sativa
Lsat_1_v5_gn_2_133601 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 213328187-213329186 Lactuca sativa
Lsat_1_v5_gn_2_133601 2.0kb upstream 2.0kb upstream 4869   true Lsat_1_v8_lg_2: 213329187-213334055 Lactuca sativa
Lsat_1_v5_gn_2_133601 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 213332056-213334055 Lactuca sativa
Lsat_1_v5_gn_2_133601 2.0kb downstream 2.0kb downstream 4869   true Lsat_1_v8_lg_2: 213327187-213332055 Lactuca sativa
Lsat_1_v5_gn_2_133601 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 213327187-213329186 Lactuca sativa
Lsat_1_v5_gn_2_133601 5.0kb upstream 5.0kb upstream 7869   true Lsat_1_v8_lg_2: 213329187-213337055 Lactuca sativa
Lsat_1_v5_gn_2_133601 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 213332056-213337055 Lactuca sativa
Lsat_1_v5_gn_2_133601 5.0kb downstream 5.0kb downstream 7869   true Lsat_1_v8_lg_2: 213324187-213332055 Lactuca sativa
Lsat_1_v5_gn_2_133601 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 213324187-213329186 Lactuca sativa
Lsat_1_v5_gn_2_133601 10.0kb upstream 10.0kb upstream 12869   true Lsat_1_v8_lg_2: 213329187-213342055 Lactuca sativa
Lsat_1_v5_gn_2_133601 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 213332056-213342055 Lactuca sativa
Lsat_1_v5_gn_2_133601 10.0kb downstream 10.0kb downstream 12869   true Lsat_1_v8_lg_2: 213319187-213332055 Lactuca sativa
Lsat_1_v5_gn_2_133601 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 213319187-213329186 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476896 5263 Asterids View MSA
123739909 5271 Pentapetalae View MSA
122789492 5272 Eudicot View MSA
122042662 5273 Angiosperm View MSA
121345279 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain