Gene : Lsat_1_v5_gn_2_134361 L. sativa V8
Defline:  (1 of 6) PF00560//PF07714//PF08263 - Leucine Rich Repeat (LRR_1) // Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  4019
Name:  ? Lsat_1_v5_gn_2_134361 Secondary Identifier:  ? PAC:38960175
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_134361 0.5kb upstream 0.5kb upstream 2590   true Lsat_1_v8_lg_2: 213606920-213609509 Lactuca sativa
Lsat_1_v5_gn_2_134361 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 213606920-213607419 Lactuca sativa
Lsat_1_v5_gn_2_134361 0.5kb downstream 0.5kb downstream 2590   true Lsat_1_v8_lg_2: 213607420-213610009 Lactuca sativa
Lsat_1_v5_gn_2_134361 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 213609510-213610009 Lactuca sativa
Lsat_1_v5_gn_2_134361 1.0kb upstream 1.0kb upstream 3090   true Lsat_1_v8_lg_2: 213606420-213609509 Lactuca sativa
Lsat_1_v5_gn_2_134361 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 213606420-213607419 Lactuca sativa
Lsat_1_v5_gn_2_134361 1.0kb downstream 1.0kb downstream 3090   true Lsat_1_v8_lg_2: 213607420-213610509 Lactuca sativa
Lsat_1_v5_gn_2_134361 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 213609510-213610509 Lactuca sativa
Lsat_1_v5_gn_2_134361 2.0kb upstream 2.0kb upstream 4090   true Lsat_1_v8_lg_2: 213605420-213609509 Lactuca sativa
Lsat_1_v5_gn_2_134361 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 213605420-213607419 Lactuca sativa
Lsat_1_v5_gn_2_134361 2.0kb downstream 2.0kb downstream 4090   true Lsat_1_v8_lg_2: 213607420-213611509 Lactuca sativa
Lsat_1_v5_gn_2_134361 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 213609510-213611509 Lactuca sativa
Lsat_1_v5_gn_2_134361 5.0kb upstream 5.0kb upstream 7090   true Lsat_1_v8_lg_2: 213602420-213609509 Lactuca sativa
Lsat_1_v5_gn_2_134361 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 213602420-213607419 Lactuca sativa
Lsat_1_v5_gn_2_134361 5.0kb downstream 5.0kb downstream 7090   true Lsat_1_v8_lg_2: 213607420-213614509 Lactuca sativa
Lsat_1_v5_gn_2_134361 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 213609510-213614509 Lactuca sativa
Lsat_1_v5_gn_2_134361 10.0kb upstream 10.0kb upstream 12090   true Lsat_1_v8_lg_2: 213597420-213609509 Lactuca sativa
Lsat_1_v5_gn_2_134361 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 213597420-213607419 Lactuca sativa
Lsat_1_v5_gn_2_134361 10.0kb downstream 10.0kb downstream 12090   true Lsat_1_v8_lg_2: 213607420-213619509 Lactuca sativa
Lsat_1_v5_gn_2_134361 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 213609510-213619509 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026275 5273 Angiosperm View MSA
121475409 5263 Asterids View MSA
123742624 5271 Pentapetalae View MSA
122793300 5272 Eudicot View MSA
121296256 5274 Embryophyte View MSA
123334452 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain