Gene : Lsat_1_v5_gn_2_134721 L. sativa V8
Defline:  (1 of 1) PTHR23076:SF40 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 11, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  4027
Name:  ? Lsat_1_v5_gn_2_134721 Secondary Identifier:  ? PAC:38958055
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_134721 0.5kb upstream 0.5kb upstream 7114   true Lsat_1_v8_lg_2: 213927406-213934519 Lactuca sativa
Lsat_1_v5_gn_2_134721 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 213927406-213927905 Lactuca sativa
Lsat_1_v5_gn_2_134721 0.5kb downstream 0.5kb downstream 7114   true Lsat_1_v8_lg_2: 213927906-213935019 Lactuca sativa
Lsat_1_v5_gn_2_134721 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 213934520-213935019 Lactuca sativa
Lsat_1_v5_gn_2_134721 1.0kb upstream 1.0kb upstream 7614   true Lsat_1_v8_lg_2: 213926906-213934519 Lactuca sativa
Lsat_1_v5_gn_2_134721 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 213926906-213927905 Lactuca sativa
Lsat_1_v5_gn_2_134721 1.0kb downstream 1.0kb downstream 7614   true Lsat_1_v8_lg_2: 213927906-213935519 Lactuca sativa
Lsat_1_v5_gn_2_134721 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 213934520-213935519 Lactuca sativa
Lsat_1_v5_gn_2_134721 2.0kb upstream 2.0kb upstream 8614   true Lsat_1_v8_lg_2: 213925906-213934519 Lactuca sativa
Lsat_1_v5_gn_2_134721 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 213925906-213927905 Lactuca sativa
Lsat_1_v5_gn_2_134721 2.0kb downstream 2.0kb downstream 8614   true Lsat_1_v8_lg_2: 213927906-213936519 Lactuca sativa
Lsat_1_v5_gn_2_134721 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 213934520-213936519 Lactuca sativa
Lsat_1_v5_gn_2_134721 5.0kb upstream 5.0kb upstream 11614   true Lsat_1_v8_lg_2: 213922906-213934519 Lactuca sativa
Lsat_1_v5_gn_2_134721 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 213922906-213927905 Lactuca sativa
Lsat_1_v5_gn_2_134721 5.0kb downstream 5.0kb downstream 11614   true Lsat_1_v8_lg_2: 213927906-213939519 Lactuca sativa
Lsat_1_v5_gn_2_134721 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 213934520-213939519 Lactuca sativa
Lsat_1_v5_gn_2_134721 10.0kb upstream 10.0kb upstream 16614   true Lsat_1_v8_lg_2: 213917906-213934519 Lactuca sativa
Lsat_1_v5_gn_2_134721 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 213917906-213927905 Lactuca sativa
Lsat_1_v5_gn_2_134721 10.0kb downstream 10.0kb downstream 16614   true Lsat_1_v8_lg_2: 213927906-213944519 Lactuca sativa
Lsat_1_v5_gn_2_134721 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 213934520-213944519 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472751 5263 Asterids View MSA
123744222 5271 Pentapetalae View MSA
122793624 5272 Eudicot View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain