Gene : Lsat_1_v5_gn_2_135900 L. sativa V8
Defline:  (1 of 1) PTHR11817:SF28 - PLASTIDIAL PYRUVATE KINASE 4, CHLOROPLASTIC Genomic Order:  4033
Name:  ? Lsat_1_v5_gn_2_135900 Secondary Identifier:  ? PAC:38958399
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ANAEROFRUCAT-PWY Lactuca sativa pathologic  
Lsativa ANAGLYCOLYSIS-PWY Lactuca sativa pathologic  
Lsativa PWY-1042 Lactuca sativa pathologic  
Lsativa PWY-5464 Lactuca sativa pathologic  
Lsativa PWY-5723 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_135900 0.5kb upstream 0.5kb upstream 5440   true Lsat_1_v8_lg_2: 214209957-214215396 Lactuca sativa
Lsat_1_v5_gn_2_135900 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 214209957-214210456 Lactuca sativa
Lsat_1_v5_gn_2_135900 0.5kb downstream 0.5kb downstream 5440   true Lsat_1_v8_lg_2: 214210457-214215896 Lactuca sativa
Lsat_1_v5_gn_2_135900 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 214215397-214215896 Lactuca sativa
Lsat_1_v5_gn_2_135900 1.0kb upstream 1.0kb upstream 5940   true Lsat_1_v8_lg_2: 214209457-214215396 Lactuca sativa
Lsat_1_v5_gn_2_135900 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 214209457-214210456 Lactuca sativa
Lsat_1_v5_gn_2_135900 1.0kb downstream 1.0kb downstream 5940   true Lsat_1_v8_lg_2: 214210457-214216396 Lactuca sativa
Lsat_1_v5_gn_2_135900 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 214215397-214216396 Lactuca sativa
Lsat_1_v5_gn_2_135900 2.0kb upstream 2.0kb upstream 6940   true Lsat_1_v8_lg_2: 214208457-214215396 Lactuca sativa
Lsat_1_v5_gn_2_135900 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 214208457-214210456 Lactuca sativa
Lsat_1_v5_gn_2_135900 2.0kb downstream 2.0kb downstream 6940   true Lsat_1_v8_lg_2: 214210457-214217396 Lactuca sativa
Lsat_1_v5_gn_2_135900 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 214215397-214217396 Lactuca sativa
Lsat_1_v5_gn_2_135900 5.0kb upstream 5.0kb upstream 9940   true Lsat_1_v8_lg_2: 214205457-214215396 Lactuca sativa
Lsat_1_v5_gn_2_135900 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 214205457-214210456 Lactuca sativa
Lsat_1_v5_gn_2_135900 5.0kb downstream 5.0kb downstream 9940   true Lsat_1_v8_lg_2: 214210457-214220396 Lactuca sativa
Lsat_1_v5_gn_2_135900 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 214215397-214220396 Lactuca sativa
Lsat_1_v5_gn_2_135900 10.0kb upstream 10.0kb upstream 14940   true Lsat_1_v8_lg_2: 214200457-214215396 Lactuca sativa
Lsat_1_v5_gn_2_135900 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 214200457-214210456 Lactuca sativa
Lsat_1_v5_gn_2_135900 10.0kb downstream 10.0kb downstream 14940   true Lsat_1_v8_lg_2: 214210457-214225396 Lactuca sativa
Lsat_1_v5_gn_2_135900 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 214215397-214225396 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470222 5263 Asterids View MSA
123738415 5271 Pentapetalae View MSA
122787981 5272 Eudicot View MSA
122044331 5273 Angiosperm View MSA
121346943 5274 Embryophyte View MSA
123380469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain