Gene : Lsat_1_v5_gn_2_136101 L. sativa V8
Defline:  (1 of 3) K03544 - ATP-dependent Clp protease ATP-binding subunit ClpX (clpX, CLPX) Genomic Order:  4043
Name:  ? Lsat_1_v5_gn_2_136101 Secondary Identifier:  ? PAC:38960507
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_136101 0.5kb upstream 0.5kb upstream 4643   true Lsat_1_v8_lg_2: 214621107-214625749 Lactuca sativa
Lsat_1_v5_gn_2_136101 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 214625250-214625749 Lactuca sativa
Lsat_1_v5_gn_2_136101 0.5kb downstream 0.5kb downstream 4643   true Lsat_1_v8_lg_2: 214620607-214625249 Lactuca sativa
Lsat_1_v5_gn_2_136101 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 214620607-214621106 Lactuca sativa
Lsat_1_v5_gn_2_136101 1.0kb upstream 1.0kb upstream 5143   true Lsat_1_v8_lg_2: 214621107-214626249 Lactuca sativa
Lsat_1_v5_gn_2_136101 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 214625250-214626249 Lactuca sativa
Lsat_1_v5_gn_2_136101 1.0kb downstream 1.0kb downstream 5143   true Lsat_1_v8_lg_2: 214620107-214625249 Lactuca sativa
Lsat_1_v5_gn_2_136101 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 214620107-214621106 Lactuca sativa
Lsat_1_v5_gn_2_136101 2.0kb upstream 2.0kb upstream 6143   true Lsat_1_v8_lg_2: 214621107-214627249 Lactuca sativa
Lsat_1_v5_gn_2_136101 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 214625250-214627249 Lactuca sativa
Lsat_1_v5_gn_2_136101 2.0kb downstream 2.0kb downstream 6143   true Lsat_1_v8_lg_2: 214619107-214625249 Lactuca sativa
Lsat_1_v5_gn_2_136101 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 214619107-214621106 Lactuca sativa
Lsat_1_v5_gn_2_136101 5.0kb upstream 5.0kb upstream 9143   true Lsat_1_v8_lg_2: 214621107-214630249 Lactuca sativa
Lsat_1_v5_gn_2_136101 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 214625250-214630249 Lactuca sativa
Lsat_1_v5_gn_2_136101 5.0kb downstream 5.0kb downstream 9143   true Lsat_1_v8_lg_2: 214616107-214625249 Lactuca sativa
Lsat_1_v5_gn_2_136101 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 214616107-214621106 Lactuca sativa
Lsat_1_v5_gn_2_136101 10.0kb upstream 10.0kb upstream 14143   true Lsat_1_v8_lg_2: 214621107-214635249 Lactuca sativa
Lsat_1_v5_gn_2_136101 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 214625250-214635249 Lactuca sativa
Lsat_1_v5_gn_2_136101 10.0kb downstream 10.0kb downstream 14143   true Lsat_1_v8_lg_2: 214611107-214625249 Lactuca sativa
Lsat_1_v5_gn_2_136101 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 214611107-214621106 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470304 5263 Asterids View MSA
123749769 5271 Pentapetalae View MSA
122790976 5272 Eudicot View MSA
122041595 5273 Angiosperm View MSA
121347739 5274 Embryophyte View MSA
123427798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain