Gene : Lsat_1_v5_gn_2_1641 L. sativa V8
Defline:  (1 of 1) K02108 - F-type H+-transporting ATPase subunit a (ATPF0A, atpB) Genomic Order:  23
Name:  ? Lsat_1_v5_gn_2_1641 Secondary Identifier:  ? PAC:38957240
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6126 Lactuca sativa pathologic  
Lsativa PWY-7219 Lactuca sativa pathologic  
Lsativa PWY-7229 Lactuca sativa pathologic  
Lsativa PWY-841 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_1641 0.5kb upstream 0.5kb upstream 1244   true Lsat_1_v8_lg_2: 1146360-1147603 Lactuca sativa
Lsat_1_v5_gn_2_1641 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 1147104-1147603 Lactuca sativa
Lsat_1_v5_gn_2_1641 0.5kb downstream 0.5kb downstream 1244   true Lsat_1_v8_lg_2: 1145860-1147103 Lactuca sativa
Lsat_1_v5_gn_2_1641 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 1145860-1146359 Lactuca sativa
Lsat_1_v5_gn_2_1641 1.0kb upstream 1.0kb upstream 1744   true Lsat_1_v8_lg_2: 1146360-1148103 Lactuca sativa
Lsat_1_v5_gn_2_1641 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 1147104-1148103 Lactuca sativa
Lsat_1_v5_gn_2_1641 1.0kb downstream 1.0kb downstream 1744   true Lsat_1_v8_lg_2: 1145360-1147103 Lactuca sativa
Lsat_1_v5_gn_2_1641 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 1145360-1146359 Lactuca sativa
Lsat_1_v5_gn_2_1641 2.0kb upstream 2.0kb upstream 2744   true Lsat_1_v8_lg_2: 1146360-1149103 Lactuca sativa
Lsat_1_v5_gn_2_1641 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 1147104-1149103 Lactuca sativa
Lsat_1_v5_gn_2_1641 2.0kb downstream 2.0kb downstream 2744   true Lsat_1_v8_lg_2: 1144360-1147103 Lactuca sativa
Lsat_1_v5_gn_2_1641 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 1144360-1146359 Lactuca sativa
Lsat_1_v5_gn_2_1641 5.0kb upstream 5.0kb upstream 5744   true Lsat_1_v8_lg_2: 1146360-1152103 Lactuca sativa
Lsat_1_v5_gn_2_1641 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 1147104-1152103 Lactuca sativa
Lsat_1_v5_gn_2_1641 5.0kb downstream 5.0kb downstream 5744   true Lsat_1_v8_lg_2: 1141360-1147103 Lactuca sativa
Lsat_1_v5_gn_2_1641 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 1141360-1146359 Lactuca sativa
Lsat_1_v5_gn_2_1641 10.0kb upstream 10.0kb upstream 10744   true Lsat_1_v8_lg_2: 1146360-1157103 Lactuca sativa
Lsat_1_v5_gn_2_1641 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 1147104-1157103 Lactuca sativa
Lsat_1_v5_gn_2_1641 10.0kb downstream 10.0kb downstream 10744   true Lsat_1_v8_lg_2: 1136360-1147103 Lactuca sativa
Lsat_1_v5_gn_2_1641 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 1136360-1146359 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029216 5273 Angiosperm View MSA
121476702 5263 Asterids View MSA
123752003 5271 Pentapetalae View MSA
122795153 5272 Eudicot View MSA
121348660 5274 Embryophyte View MSA
123428637 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain