Gene : Lsat_1_v5_gn_2_16021 L. sativa V8
Defline:  (1 of 1) 1.3.1.70 - Delta(14)-sterol reductase / Sterol C14-reductase Genomic Order:  411
Name:  ? Lsat_1_v5_gn_2_16021 Secondary Identifier:  ? PAC:38963168
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-2541 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_16021 0.5kb upstream 0.5kb upstream 4215   true Lsat_1_v8_lg_2: 31294403-31298617 Lactuca sativa
Lsat_1_v5_gn_2_16021 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 31294403-31294902 Lactuca sativa
Lsat_1_v5_gn_2_16021 0.5kb downstream 0.5kb downstream 4215   true Lsat_1_v8_lg_2: 31294903-31299117 Lactuca sativa
Lsat_1_v5_gn_2_16021 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 31298618-31299117 Lactuca sativa
Lsat_1_v5_gn_2_16021 1.0kb upstream 1.0kb upstream 4715   true Lsat_1_v8_lg_2: 31293903-31298617 Lactuca sativa
Lsat_1_v5_gn_2_16021 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 31293903-31294902 Lactuca sativa
Lsat_1_v5_gn_2_16021 1.0kb downstream 1.0kb downstream 4715   true Lsat_1_v8_lg_2: 31294903-31299617 Lactuca sativa
Lsat_1_v5_gn_2_16021 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 31298618-31299617 Lactuca sativa
Lsat_1_v5_gn_2_16021 2.0kb upstream 2.0kb upstream 5715   true Lsat_1_v8_lg_2: 31292903-31298617 Lactuca sativa
Lsat_1_v5_gn_2_16021 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 31292903-31294902 Lactuca sativa
Lsat_1_v5_gn_2_16021 2.0kb downstream 2.0kb downstream 5715   true Lsat_1_v8_lg_2: 31294903-31300617 Lactuca sativa
Lsat_1_v5_gn_2_16021 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 31298618-31300617 Lactuca sativa
Lsat_1_v5_gn_2_16021 5.0kb upstream 5.0kb upstream 8715   true Lsat_1_v8_lg_2: 31289903-31298617 Lactuca sativa
Lsat_1_v5_gn_2_16021 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 31289903-31294902 Lactuca sativa
Lsat_1_v5_gn_2_16021 5.0kb downstream 5.0kb downstream 8715   true Lsat_1_v8_lg_2: 31294903-31303617 Lactuca sativa
Lsat_1_v5_gn_2_16021 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 31298618-31303617 Lactuca sativa
Lsat_1_v5_gn_2_16021 10.0kb upstream 10.0kb upstream 13715   true Lsat_1_v8_lg_2: 31284903-31298617 Lactuca sativa
Lsat_1_v5_gn_2_16021 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 31284903-31294902 Lactuca sativa
Lsat_1_v5_gn_2_16021 10.0kb downstream 10.0kb downstream 13715   true Lsat_1_v8_lg_2: 31294903-31308617 Lactuca sativa
Lsat_1_v5_gn_2_16021 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 31298618-31308617 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121442541 5263 Asterids Singleton cluster - no MSA
123743955 5271 Pentapetalae View MSA
122786047 5272 Eudicot View MSA
122044156 5273 Angiosperm View MSA
121351053 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain