Gene : Lsat_1_v5_gn_2_17460 L. sativa V8
Defline:  (1 of 2) PTHR12701:SF20 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MIG5 Genomic Order:  490
Name:  ? Lsat_1_v5_gn_2_17460 Secondary Identifier:  ? PAC:38958540
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_17460 0.5kb upstream 0.5kb upstream 1933   true Lsat_1_v8_lg_2: 39988577-39990509 Lactuca sativa
Lsat_1_v5_gn_2_17460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 39990010-39990509 Lactuca sativa
Lsat_1_v5_gn_2_17460 0.5kb downstream 0.5kb downstream 1933   true Lsat_1_v8_lg_2: 39988077-39990009 Lactuca sativa
Lsat_1_v5_gn_2_17460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 39988077-39988576 Lactuca sativa
Lsat_1_v5_gn_2_17460 1.0kb upstream 1.0kb upstream 2433   true Lsat_1_v8_lg_2: 39988577-39991009 Lactuca sativa
Lsat_1_v5_gn_2_17460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 39990010-39991009 Lactuca sativa
Lsat_1_v5_gn_2_17460 1.0kb downstream 1.0kb downstream 2433   true Lsat_1_v8_lg_2: 39987577-39990009 Lactuca sativa
Lsat_1_v5_gn_2_17460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 39987577-39988576 Lactuca sativa
Lsat_1_v5_gn_2_17460 2.0kb upstream 2.0kb upstream 3433   true Lsat_1_v8_lg_2: 39988577-39992009 Lactuca sativa
Lsat_1_v5_gn_2_17460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 39990010-39992009 Lactuca sativa
Lsat_1_v5_gn_2_17460 2.0kb downstream 2.0kb downstream 3433   true Lsat_1_v8_lg_2: 39986577-39990009 Lactuca sativa
Lsat_1_v5_gn_2_17460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 39986577-39988576 Lactuca sativa
Lsat_1_v5_gn_2_17460 5.0kb upstream 5.0kb upstream 6433   true Lsat_1_v8_lg_2: 39988577-39995009 Lactuca sativa
Lsat_1_v5_gn_2_17460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 39990010-39995009 Lactuca sativa
Lsat_1_v5_gn_2_17460 5.0kb downstream 5.0kb downstream 6433   true Lsat_1_v8_lg_2: 39983577-39990009 Lactuca sativa
Lsat_1_v5_gn_2_17460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 39983577-39988576 Lactuca sativa
Lsat_1_v5_gn_2_17460 10.0kb upstream 10.0kb upstream 11433   true Lsat_1_v8_lg_2: 39988577-40000009 Lactuca sativa
Lsat_1_v5_gn_2_17460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 39990010-40000009 Lactuca sativa
Lsat_1_v5_gn_2_17460 10.0kb downstream 10.0kb downstream 11433   true Lsat_1_v8_lg_2: 39978577-39990009 Lactuca sativa
Lsat_1_v5_gn_2_17460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 39978577-39988576 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470958 5263 Asterids View MSA
123738808 5271 Pentapetalae View MSA
122789098 5272 Eudicot View MSA
122042109 5273 Angiosperm View MSA
121344883 5274 Embryophyte View MSA
123380122 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain