Gene : Lsat_1_v5_gn_2_17061 L. sativa V8
Defline:  (1 of 1) K09602 - ubiquitin thioesterase protein OTUB1 [EC:3.4.19.12] (OTUB1) Genomic Order:  471
Name:  ? Lsat_1_v5_gn_2_17061 Secondary Identifier:  ? PAC:38961918
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_17061 0.5kb upstream 0.5kb upstream 4766   true Lsat_1_v8_lg_2: 36734093-36738858 Lactuca sativa
Lsat_1_v5_gn_2_17061 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 36734093-36734592 Lactuca sativa
Lsat_1_v5_gn_2_17061 0.5kb downstream 0.5kb downstream 4766   true Lsat_1_v8_lg_2: 36734593-36739358 Lactuca sativa
Lsat_1_v5_gn_2_17061 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 36738859-36739358 Lactuca sativa
Lsat_1_v5_gn_2_17061 1.0kb upstream 1.0kb upstream 5266   true Lsat_1_v8_lg_2: 36733593-36738858 Lactuca sativa
Lsat_1_v5_gn_2_17061 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 36733593-36734592 Lactuca sativa
Lsat_1_v5_gn_2_17061 1.0kb downstream 1.0kb downstream 5266   true Lsat_1_v8_lg_2: 36734593-36739858 Lactuca sativa
Lsat_1_v5_gn_2_17061 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 36738859-36739858 Lactuca sativa
Lsat_1_v5_gn_2_17061 2.0kb upstream 2.0kb upstream 6266   true Lsat_1_v8_lg_2: 36732593-36738858 Lactuca sativa
Lsat_1_v5_gn_2_17061 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 36732593-36734592 Lactuca sativa
Lsat_1_v5_gn_2_17061 2.0kb downstream 2.0kb downstream 6266   true Lsat_1_v8_lg_2: 36734593-36740858 Lactuca sativa
Lsat_1_v5_gn_2_17061 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 36738859-36740858 Lactuca sativa
Lsat_1_v5_gn_2_17061 5.0kb upstream 5.0kb upstream 9266   true Lsat_1_v8_lg_2: 36729593-36738858 Lactuca sativa
Lsat_1_v5_gn_2_17061 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 36729593-36734592 Lactuca sativa
Lsat_1_v5_gn_2_17061 5.0kb downstream 5.0kb downstream 9266   true Lsat_1_v8_lg_2: 36734593-36743858 Lactuca sativa
Lsat_1_v5_gn_2_17061 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 36738859-36743858 Lactuca sativa
Lsat_1_v5_gn_2_17061 10.0kb upstream 10.0kb upstream 14266   true Lsat_1_v8_lg_2: 36724593-36738858 Lactuca sativa
Lsat_1_v5_gn_2_17061 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 36724593-36734592 Lactuca sativa
Lsat_1_v5_gn_2_17061 10.0kb downstream 10.0kb downstream 14266   true Lsat_1_v8_lg_2: 36734593-36748858 Lactuca sativa
Lsat_1_v5_gn_2_17061 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 36738859-36748858 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468698 5263 Asterids View MSA
123752549 5271 Pentapetalae View MSA
122787068 5272 Eudicot View MSA
122043006 5273 Angiosperm View MSA
121344850 5274 Embryophyte View MSA
123424451 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain