Gene : Lsat_1_v5_gn_2_109441 L. sativa V8
Defline:  (1 of 1) 2.1.1.177 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase / rRNA large subunit methyltransferase H Genomic Order:  3180
Name:  ? Lsat_1_v5_gn_2_109441 Secondary Identifier:  ? PAC:38959160
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_109441 0.5kb upstream 0.5kb upstream 1734   true Lsat_1_v8_lg_2: 187752812-187754545 Lactuca sativa
Lsat_1_v5_gn_2_109441 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 187754046-187754545 Lactuca sativa
Lsat_1_v5_gn_2_109441 0.5kb downstream 0.5kb downstream 1734   true Lsat_1_v8_lg_2: 187752312-187754045 Lactuca sativa
Lsat_1_v5_gn_2_109441 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 187752312-187752811 Lactuca sativa
Lsat_1_v5_gn_2_109441 1.0kb upstream 1.0kb upstream 2234   true Lsat_1_v8_lg_2: 187752812-187755045 Lactuca sativa
Lsat_1_v5_gn_2_109441 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 187754046-187755045 Lactuca sativa
Lsat_1_v5_gn_2_109441 1.0kb downstream 1.0kb downstream 2234   true Lsat_1_v8_lg_2: 187751812-187754045 Lactuca sativa
Lsat_1_v5_gn_2_109441 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 187751812-187752811 Lactuca sativa
Lsat_1_v5_gn_2_109441 2.0kb upstream 2.0kb upstream 3234   true Lsat_1_v8_lg_2: 187752812-187756045 Lactuca sativa
Lsat_1_v5_gn_2_109441 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 187754046-187756045 Lactuca sativa
Lsat_1_v5_gn_2_109441 2.0kb downstream 2.0kb downstream 3234   true Lsat_1_v8_lg_2: 187750812-187754045 Lactuca sativa
Lsat_1_v5_gn_2_109441 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 187750812-187752811 Lactuca sativa
Lsat_1_v5_gn_2_109441 5.0kb upstream 5.0kb upstream 6234   true Lsat_1_v8_lg_2: 187752812-187759045 Lactuca sativa
Lsat_1_v5_gn_2_109441 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 187754046-187759045 Lactuca sativa
Lsat_1_v5_gn_2_109441 5.0kb downstream 5.0kb downstream 6234   true Lsat_1_v8_lg_2: 187747812-187754045 Lactuca sativa
Lsat_1_v5_gn_2_109441 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 187747812-187752811 Lactuca sativa
Lsat_1_v5_gn_2_109441 10.0kb upstream 10.0kb upstream 11234   true Lsat_1_v8_lg_2: 187752812-187764045 Lactuca sativa
Lsat_1_v5_gn_2_109441 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 187754046-187764045 Lactuca sativa
Lsat_1_v5_gn_2_109441 10.0kb downstream 10.0kb downstream 11234   true Lsat_1_v8_lg_2: 187742812-187754045 Lactuca sativa
Lsat_1_v5_gn_2_109441 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 187742812-187752811 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041237 5273 Angiosperm View MSA
121468703 5263 Asterids View MSA
123737666 5271 Pentapetalae View MSA
122786404 5272 Eudicot View MSA
121344768 5274 Embryophyte View MSA
123424832 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain