Gene : Lsat_1_v5_gn_2_109100 L. sativa V8
Defline:  (1 of 26) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  3160
Name:  ? Lsat_1_v5_gn_2_109100 Secondary Identifier:  ? PAC:38961754
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_109100 0.5kb upstream 0.5kb upstream 3461   true Lsat_1_v8_lg_2: 186939392-186942852 Lactuca sativa
Lsat_1_v5_gn_2_109100 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 186942353-186942852 Lactuca sativa
Lsat_1_v5_gn_2_109100 0.5kb downstream 0.5kb downstream 3461   true Lsat_1_v8_lg_2: 186938892-186942352 Lactuca sativa
Lsat_1_v5_gn_2_109100 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 186938892-186939391 Lactuca sativa
Lsat_1_v5_gn_2_109100 1.0kb upstream 1.0kb upstream 3961   true Lsat_1_v8_lg_2: 186939392-186943352 Lactuca sativa
Lsat_1_v5_gn_2_109100 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 186942353-186943352 Lactuca sativa
Lsat_1_v5_gn_2_109100 1.0kb downstream 1.0kb downstream 3961   true Lsat_1_v8_lg_2: 186938392-186942352 Lactuca sativa
Lsat_1_v5_gn_2_109100 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 186938392-186939391 Lactuca sativa
Lsat_1_v5_gn_2_109100 2.0kb upstream 2.0kb upstream 4961   true Lsat_1_v8_lg_2: 186939392-186944352 Lactuca sativa
Lsat_1_v5_gn_2_109100 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 186942353-186944352 Lactuca sativa
Lsat_1_v5_gn_2_109100 2.0kb downstream 2.0kb downstream 4961   true Lsat_1_v8_lg_2: 186937392-186942352 Lactuca sativa
Lsat_1_v5_gn_2_109100 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 186937392-186939391 Lactuca sativa
Lsat_1_v5_gn_2_109100 5.0kb upstream 5.0kb upstream 7961   true Lsat_1_v8_lg_2: 186939392-186947352 Lactuca sativa
Lsat_1_v5_gn_2_109100 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 186942353-186947352 Lactuca sativa
Lsat_1_v5_gn_2_109100 5.0kb downstream 5.0kb downstream 7961   true Lsat_1_v8_lg_2: 186934392-186942352 Lactuca sativa
Lsat_1_v5_gn_2_109100 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 186934392-186939391 Lactuca sativa
Lsat_1_v5_gn_2_109100 10.0kb upstream 10.0kb upstream 12961   true Lsat_1_v8_lg_2: 186939392-186952352 Lactuca sativa
Lsat_1_v5_gn_2_109100 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 186942353-186952352 Lactuca sativa
Lsat_1_v5_gn_2_109100 10.0kb downstream 10.0kb downstream 12961   true Lsat_1_v8_lg_2: 186929392-186942352 Lactuca sativa
Lsat_1_v5_gn_2_109100 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 186929392-186939391 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472187 5263 Asterids View MSA
123743168 5271 Pentapetalae View MSA
122791271 5272 Eudicot View MSA
122050644 5273 Angiosperm View MSA
121312043 5274 Embryophyte View MSA
123349254 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain