Gene : Lsat_1_v5_gn_2_111701 L. sativa V8
Defline:  (1 of 1) K03404 - magnesium chelatase subunit D (chlD, bchD) Genomic Order:  3251
Name:  ? Lsat_1_v5_gn_2_111701 Secondary Identifier:  ? PAC:38960163
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa CHLOROPHYLL-SYN Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_111701 0.5kb upstream 0.5kb upstream 4693   true Lsat_1_v8_lg_2: 189869044-189873736 Lactuca sativa
Lsat_1_v5_gn_2_111701 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 189869044-189869543 Lactuca sativa
Lsat_1_v5_gn_2_111701 0.5kb downstream 0.5kb downstream 4693   true Lsat_1_v8_lg_2: 189869544-189874236 Lactuca sativa
Lsat_1_v5_gn_2_111701 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 189873737-189874236 Lactuca sativa
Lsat_1_v5_gn_2_111701 1.0kb upstream 1.0kb upstream 5193   true Lsat_1_v8_lg_2: 189868544-189873736 Lactuca sativa
Lsat_1_v5_gn_2_111701 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 189868544-189869543 Lactuca sativa
Lsat_1_v5_gn_2_111701 1.0kb downstream 1.0kb downstream 5193   true Lsat_1_v8_lg_2: 189869544-189874736 Lactuca sativa
Lsat_1_v5_gn_2_111701 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 189873737-189874736 Lactuca sativa
Lsat_1_v5_gn_2_111701 2.0kb upstream 2.0kb upstream 6193   true Lsat_1_v8_lg_2: 189867544-189873736 Lactuca sativa
Lsat_1_v5_gn_2_111701 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 189867544-189869543 Lactuca sativa
Lsat_1_v5_gn_2_111701 2.0kb downstream 2.0kb downstream 6193   true Lsat_1_v8_lg_2: 189869544-189875736 Lactuca sativa
Lsat_1_v5_gn_2_111701 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 189873737-189875736 Lactuca sativa
Lsat_1_v5_gn_2_111701 5.0kb upstream 5.0kb upstream 9193   true Lsat_1_v8_lg_2: 189864544-189873736 Lactuca sativa
Lsat_1_v5_gn_2_111701 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 189864544-189869543 Lactuca sativa
Lsat_1_v5_gn_2_111701 5.0kb downstream 5.0kb downstream 9193   true Lsat_1_v8_lg_2: 189869544-189878736 Lactuca sativa
Lsat_1_v5_gn_2_111701 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 189873737-189878736 Lactuca sativa
Lsat_1_v5_gn_2_111701 10.0kb upstream 10.0kb upstream 14193   true Lsat_1_v8_lg_2: 189859544-189873736 Lactuca sativa
Lsat_1_v5_gn_2_111701 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 189859544-189869543 Lactuca sativa
Lsat_1_v5_gn_2_111701 10.0kb downstream 10.0kb downstream 14193   true Lsat_1_v8_lg_2: 189869544-189883736 Lactuca sativa
Lsat_1_v5_gn_2_111701 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 189873737-189883736 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026552 5273 Angiosperm View MSA
121474843 5263 Asterids View MSA
123740767 5271 Pentapetalae View MSA
122793676 5272 Eudicot View MSA
121344824 5274 Embryophyte View MSA
123424530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain