Gene : Lsat_1_v5_gn_2_111220 L. sativa V8
Defline:  (1 of 2) PTHR21726//PTHR21726:SF49 - PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED // PHOSPHATIDYLINOSITOL N-ACETYGLUCOSAMINLYTRANSFERASE SUBUNIT P-LIKE PROTEIN Genomic Order:  3237
Name:  ? Lsat_1_v5_gn_2_111220 Secondary Identifier:  ? PAC:38962998
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_111220 0.5kb upstream 0.5kb upstream 3926   true Lsat_1_v8_lg_2: 189570765-189574690 Lactuca sativa
Lsat_1_v5_gn_2_111220 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 189574191-189574690 Lactuca sativa
Lsat_1_v5_gn_2_111220 0.5kb downstream 0.5kb downstream 3926   true Lsat_1_v8_lg_2: 189570265-189574190 Lactuca sativa
Lsat_1_v5_gn_2_111220 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 189570265-189570764 Lactuca sativa
Lsat_1_v5_gn_2_111220 1.0kb upstream 1.0kb upstream 4426   true Lsat_1_v8_lg_2: 189570765-189575190 Lactuca sativa
Lsat_1_v5_gn_2_111220 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 189574191-189575190 Lactuca sativa
Lsat_1_v5_gn_2_111220 1.0kb downstream 1.0kb downstream 4426   true Lsat_1_v8_lg_2: 189569765-189574190 Lactuca sativa
Lsat_1_v5_gn_2_111220 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 189569765-189570764 Lactuca sativa
Lsat_1_v5_gn_2_111220 2.0kb upstream 2.0kb upstream 5426   true Lsat_1_v8_lg_2: 189570765-189576190 Lactuca sativa
Lsat_1_v5_gn_2_111220 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 189574191-189576190 Lactuca sativa
Lsat_1_v5_gn_2_111220 2.0kb downstream 2.0kb downstream 5426   true Lsat_1_v8_lg_2: 189568765-189574190 Lactuca sativa
Lsat_1_v5_gn_2_111220 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 189568765-189570764 Lactuca sativa
Lsat_1_v5_gn_2_111220 5.0kb upstream 5.0kb upstream 8426   true Lsat_1_v8_lg_2: 189570765-189579190 Lactuca sativa
Lsat_1_v5_gn_2_111220 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 189574191-189579190 Lactuca sativa
Lsat_1_v5_gn_2_111220 5.0kb downstream 5.0kb downstream 8426   true Lsat_1_v8_lg_2: 189565765-189574190 Lactuca sativa
Lsat_1_v5_gn_2_111220 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 189565765-189570764 Lactuca sativa
Lsat_1_v5_gn_2_111220 10.0kb upstream 10.0kb upstream 13426   true Lsat_1_v8_lg_2: 189570765-189584190 Lactuca sativa
Lsat_1_v5_gn_2_111220 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 189574191-189584190 Lactuca sativa
Lsat_1_v5_gn_2_111220 10.0kb downstream 10.0kb downstream 13426   true Lsat_1_v8_lg_2: 189560765-189574190 Lactuca sativa
Lsat_1_v5_gn_2_111220 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 189560765-189570764 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471500 5263 Asterids View MSA
123752658 5271 Pentapetalae View MSA
122796149 5272 Eudicot View MSA
122047925 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain