Gene : Lsat_1_v5_gn_2_113040 L. sativa V8
Defline:  (1 of 1) 5.4.99.22 - 23S rRNA pseudouridine(2605) synthase Genomic Order:  3287
Name:  ? Lsat_1_v5_gn_2_113040 Secondary Identifier:  ? PAC:38959230
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_113040 0.5kb upstream 0.5kb upstream 3131   true Lsat_1_v8_lg_2: 190743129-190746259 Lactuca sativa
Lsat_1_v5_gn_2_113040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 190745760-190746259 Lactuca sativa
Lsat_1_v5_gn_2_113040 0.5kb downstream 0.5kb downstream 3131   true Lsat_1_v8_lg_2: 190742629-190745759 Lactuca sativa
Lsat_1_v5_gn_2_113040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 190742629-190743128 Lactuca sativa
Lsat_1_v5_gn_2_113040 1.0kb upstream 1.0kb upstream 3631   true Lsat_1_v8_lg_2: 190743129-190746759 Lactuca sativa
Lsat_1_v5_gn_2_113040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 190745760-190746759 Lactuca sativa
Lsat_1_v5_gn_2_113040 1.0kb downstream 1.0kb downstream 3631   true Lsat_1_v8_lg_2: 190742129-190745759 Lactuca sativa
Lsat_1_v5_gn_2_113040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 190742129-190743128 Lactuca sativa
Lsat_1_v5_gn_2_113040 2.0kb upstream 2.0kb upstream 4631   true Lsat_1_v8_lg_2: 190743129-190747759 Lactuca sativa
Lsat_1_v5_gn_2_113040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 190745760-190747759 Lactuca sativa
Lsat_1_v5_gn_2_113040 2.0kb downstream 2.0kb downstream 4631   true Lsat_1_v8_lg_2: 190741129-190745759 Lactuca sativa
Lsat_1_v5_gn_2_113040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 190741129-190743128 Lactuca sativa
Lsat_1_v5_gn_2_113040 5.0kb upstream 5.0kb upstream 7631   true Lsat_1_v8_lg_2: 190743129-190750759 Lactuca sativa
Lsat_1_v5_gn_2_113040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 190745760-190750759 Lactuca sativa
Lsat_1_v5_gn_2_113040 5.0kb downstream 5.0kb downstream 7631   true Lsat_1_v8_lg_2: 190738129-190745759 Lactuca sativa
Lsat_1_v5_gn_2_113040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 190738129-190743128 Lactuca sativa
Lsat_1_v5_gn_2_113040 10.0kb upstream 10.0kb upstream 12631   true Lsat_1_v8_lg_2: 190743129-190755759 Lactuca sativa
Lsat_1_v5_gn_2_113040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 190745760-190755759 Lactuca sativa
Lsat_1_v5_gn_2_113040 10.0kb downstream 10.0kb downstream 12631   true Lsat_1_v8_lg_2: 190733129-190745759 Lactuca sativa
Lsat_1_v5_gn_2_113040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 190733129-190743128 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466322 5263 Asterids View MSA
123747131 5271 Pentapetalae View MSA
122791737 5272 Eudicot View MSA
122046867 5273 Angiosperm View MSA
121350601 5274 Embryophyte View MSA
123427017 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain